Detail information of GWHGAAZE011597


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008372815.16.98785E-92PREDICTED: uncharacterized protein LOC103436170 [Malus domestica]
trEMBLtr|I1NQ67|I1NQ67_ORYGL0.000003Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA01G0200700.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene6784947767854520-
GWHAAZE00000003mRNA6784947767854520-
GWHAAZE00000003exon6784947767849997-
GWHAAZE00000003exon6785010067850192-
GWHAAZE00000003exon6785265867852756-
GWHAAZE00000003exon6785285167852957-
GWHAAZE00000003exon6785306767853098-
GWHAAZE00000003exon6785430667854520-
GWHAAZE00000003CDS6785430667854520-
GWHAAZE00000003CDS6785306767853098-
GWHAAZE00000003CDS6785285167852957-
GWHAAZE00000003CDS6785265867852756-
GWHAAZE00000003CDS6785010067850192-
GWHAAZE00000003CDS6784954567849997-
GWHAAZE00000003three_prime_UTR6784947767849544-
Transcript Sequence

Network for GWHGAAZE011597

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0301


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.070
SRR3591712Green floral bud0.051
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.020
SRR8316896Juvenile bud stage 0.118
SRR8316897Juvenile bud stage 0.098
SRR8316894Third green stage 0.063
SRR8316900Third green stage 0.120
SRR8316901Third green stage 0.032
SRR8316898Complete white stage 0.039
SRR8316899Complete white stage 0.142
SRR8316903Complete white stage 0.141
SRR8316902Silver flowering stage0.068
SRR8316904Silver flowering stage0.034
SRR8316905Silver flowering stage0.016
SRR8316906Gold flowering stage 0.061
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.005
SRR6706288Light intensity 20%0.000
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 21.151
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.081
CNS0095598Silvery flower (diploied) 10.033
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.082
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.008
CNS0095604Slightly white alabastrum(tetraploid) 10.122
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.131
CNS0095607Whole white alabastrum(tetraploid) 10.063
CNS0095608Whole white alabastrum(tetraploid) 20.041
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.070
CNS0095612Silvery flower (tetraploid) 30.089
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.053
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.072
CRR073299Stem 30.166
CRR073300Leaf 10.005
CRR073301Leaf 20.178
CRR073302Leaf 30.027
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.040
CRR073309Second white 10.017
CRR073310Second white 20.000
CRR073311Second white 30.021
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000