Detail information of GWHGAAZE011717


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009591035.16.49705E-52PREDICTED: auxin-responsive protein IAA7-like [Nicotiana tomentosiformis]
Swissprottr|Q38832|IAA14_ARATH5E-46Auxin-responsive protein IAA14
trEMBLtr|A0A068TUY9|A0A068TUY9_COFCA3E-52Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIR10AT4G14550.18E-38indole-3-acetic acid inducible 14

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7190260071905475-
GWHAAZE00000003mRNA7190260071905475-
GWHAAZE00000003exon7190260071902637-
GWHAAZE00000003exon7190286771902906-
GWHAAZE00000003exon7190302171903078-
GWHAAZE00000003exon7190422771904420-
GWHAAZE00000003exon7190540771905475-
GWHAAZE00000003CDS7190540771905475-
GWHAAZE00000003CDS7190422771904420-
GWHAAZE00000003CDS7190302171903078-
GWHAAZE00000003CDS7190286771902906-
GWHAAZE00000003CDS7190260071902637-
Transcript Sequence

Network for GWHGAAZE011717

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.17AUX_IAA21883.80E-28
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf92.843
SRR3591706second leaf44.163
SRR3591707mature leaf98.449
SRR3591708Shoot apex15.010
SRR3591709Stem61.171
SRR3591710White floral bud92.578
SRR3591711White flower310.483
SRR3591712Green floral bud9.232
SRR3591713Yellow flower86.740
SRP173429 SRR8316895Juvenile bud stage 4.652
SRR8316896Juvenile bud stage 6.997
SRR8316897Juvenile bud stage 1.361
SRR8316894Third green stage 2.088
SRR8316900Third green stage 2.078
SRR8316901Third green stage 5.319
SRR8316898Complete white stage 25.630
SRR8316899Complete white stage 13.236
SRR8316903Complete white stage 44.366
SRR8316902Silver flowering stage278.922
SRR8316904Silver flowering stage341.313
SRR8316905Silver flowering stage232.507
SRR8316906Gold flowering stage 594.986
SRR8316907Gold flowering stage 469.006
SRR8316908Gold flowering stage 408.915
SRP132670SRR6706286Control7.700
SRR6706287Light intensity 50%11.082
SRR6706288Light intensity 20%8.400
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.730
CNS0095593Slightly white alabastrum(diploid) 28.323
CNS0095594Slightly white alabastrum(diploid) 38.485
CNS0095595Whole white alabastrum(diploid) 23.614
CNS0095596Whole white alabastrum(diploid) 35.104
CNS0095597Whole white alabastrum(diploid) 45.040
CNS0095598Silvery flower (diploied) 150.621
CNS0095599Silvery flower (diploied) 281.220
CNS0095600Silvery flower (diploied) 3209.101
CNS0095601Golden flower (diploid) 181.639
CNS0095602Golden flower (diploid) 292.532
CNS0095603Golden flower (diploid) 389.353
CNS0095604Slightly white alabastrum(tetraploid) 17.738
CNS0095605Slightly white alabastrum(tetraploid) 26.716
CNS0095606Slightly white alabastrum(tetraploid) 318.557
CNS0095607Whole white alabastrum(tetraploid) 13.841
CNS0095608Whole white alabastrum(tetraploid) 23.758
CNS0095609Whole white alabastrum(tetraploid) 36.626
CNS0095610Silvery flower (tetraploid) 1175.464
CNS0095611Silvery flower (tetraploid) 2202.271
CNS0095612Silvery flower (tetraploid) 3183.084
CNS0095613Golden flower (tetraploid) 1112.631
CNS0095614Golden flower (tetraploid) 280.994
CNS0095615Golden flower (tetraploid) 3122.416
CRA001975CRR073297Stem 19.579
CRR073298Stem 29.986
CRR073299Stem 310.908
CRR073300Leaf 111.262
CRR073301Leaf 214.385
CRR073302Leaf 37.900
CRR073303Juvenile bud 111.591
CRR073304Juvenile bud 225.053
CRR073305Juvenile bud 311.243
CRR073306Third green 11136.666
CRR073307Third green 2948.761
CRR073308Third green 31008.842
CRR073309Second white 1645.574
CRR073310Second white 21180.708
CRR073311Second white 3629.600
CRR073312Silver flowering 1224.196
CRR073313Silver flowering 2137.708
CRR073314Silver flowering 3153.836
CRR073315Gold flowering 179.723
CRR073316Gold flowering 245.436
CRR073317Gold flowering 342.674
CRR073318Tawny withering 12.711
CRR073319Tawny withering 23.402
CRR073320Tawny withering 33.732