Detail information of GWHGAAZE011734


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007039702.11.87331E-58Golgin subfamily A member 6-like protein 4, putative [Theobroma cacao]
trEMBLtr|A0A061G494|A0A061G494_THECC7E-59Golgin subfamily A member 6-like protein 4, putative {ECO:0000313|EMBL:EOY24203.1}
TAIR10AT4G17010.15E-34Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7218267772186457+
GWHAAZE00000003mRNA7218267772186457+
GWHAAZE00000003exon7218267772182860+
GWHAAZE00000003exon7218451072184620+
GWHAAZE00000003exon7218619972186457+
GWHAAZE00000003five_prime_UTR7218267772182776+
GWHAAZE00000003CDS7218277772182860+
GWHAAZE00000003CDS7218451072184620+
GWHAAZE00000003CDS7218619972186432+
GWHAAZE00000003three_prime_UTR7218643372186457+
Transcript Sequence

Network for GWHGAAZE011734

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.462
SRR3591710White floral bud0.000
SRR3591711White flower0.248
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.954
SRR8316896Juvenile bud stage 4.200
SRR8316897Juvenile bud stage 0.175
SRR8316894Third green stage 1.965
SRR8316900Third green stage 4.330
SRR8316901Third green stage 4.080
SRR8316898Complete white stage 2.188
SRR8316899Complete white stage 4.914
SRR8316903Complete white stage 2.185
SRR8316902Silver flowering stage1.645
SRR8316904Silver flowering stage1.786
SRR8316905Silver flowering stage0.959
SRR8316906Gold flowering stage 4.083
SRR8316907Gold flowering stage 3.957
SRR8316908Gold flowering stage 2.040
SRP132670SRR6706286Control4.205
SRR6706287Light intensity 50%4.796
SRR6706288Light intensity 20%4.178
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.034
CNS0095593Slightly white alabastrum(diploid) 23.311
CNS0095594Slightly white alabastrum(diploid) 33.130
CNS0095595Whole white alabastrum(diploid) 24.606
CNS0095596Whole white alabastrum(diploid) 33.079
CNS0095597Whole white alabastrum(diploid) 43.355
CNS0095598Silvery flower (diploied) 11.710
CNS0095599Silvery flower (diploied) 22.345
CNS0095600Silvery flower (diploied) 32.888
CNS0095601Golden flower (diploid) 13.716
CNS0095602Golden flower (diploid) 23.104
CNS0095603Golden flower (diploid) 32.269
CNS0095604Slightly white alabastrum(tetraploid) 10.195
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.171
CNS0095607Whole white alabastrum(tetraploid) 10.079
CNS0095608Whole white alabastrum(tetraploid) 20.104
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.885
CRR073298Stem 21.716
CRR073299Stem 30.453
CRR073300Leaf 12.655
CRR073301Leaf 21.208
CRR073302Leaf 32.264
CRR073303Juvenile bud 11.571
CRR073304Juvenile bud 21.199
CRR073305Juvenile bud 30.552
CRR073306Third green 10.178
CRR073307Third green 20.126
CRR073308Third green 30.474
CRR073309Second white 10.358
CRR073310Second white 20.949
CRR073311Second white 30.403
CRR073312Silver flowering 10.633
CRR073313Silver flowering 20.177
CRR073314Silver flowering 30.259
CRR073315Gold flowering 10.086
CRR073316Gold flowering 20.913
CRR073317Gold flowering 30.565
CRR073318Tawny withering 11.417
CRR073319Tawny withering 21.361
CRR073320Tawny withering 30.208