Detail information of GWHGAAZE011801


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP40178.11.47482E-20hypothetical protein JCGZ_02176 [Jatropha curcas]
Swissprottr|O81154|CYSK_SOLTU9E-22Cysteine synthase
trEMBLtr|M1D5N1|M1D5N1_SOLTU3E-21Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400082111}
TAIR10AT3G22460.13E-17O-acetylserine (thiol) lyase (OAS-TL) isoform A2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7341126773413174-
GWHAAZE00000003mRNA7341126773413174-
GWHAAZE00000003exon7341126773411359-
GWHAAZE00000003exon7341222073412294-
GWHAAZE00000003exon7341313673413174-
GWHAAZE00000003CDS7341313673413174-
GWHAAZE00000003CDS7341222073412294-
GWHAAZE00000003CDS7341126773411359-
Transcript Sequence

Network for GWHGAAZE011801

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01738cysK Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Sulfur metabolismmap00920
Cysteine and methionine metabolismmap00270

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.568
SRR3591706second leaf1.430
SRR3591707mature leaf1.924
SRR3591708Shoot apex3.302
SRR3591709Stem6.344
SRR3591710White floral bud19.842
SRR3591711White flower15.871
SRR3591712Green floral bud16.254
SRR3591713Yellow flower11.742
SRP173429 SRR8316895Juvenile bud stage 7.606
SRR8316896Juvenile bud stage 5.320
SRR8316897Juvenile bud stage 3.675
SRR8316894Third green stage 4.848
SRR8316900Third green stage 9.638
SRR8316901Third green stage 9.223
SRR8316898Complete white stage 3.096
SRR8316899Complete white stage 11.824
SRR8316903Complete white stage 8.053
SRR8316902Silver flowering stage7.561
SRR8316904Silver flowering stage8.042
SRR8316905Silver flowering stage1.761
SRR8316906Gold flowering stage 6.981
SRR8316907Gold flowering stage 10.973
SRR8316908Gold flowering stage 6.655
SRP132670SRR6706286Control5.906
SRR6706287Light intensity 50%6.717
SRR6706288Light intensity 20%6.958
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.944
CNS0095593Slightly white alabastrum(diploid) 212.584
CNS0095594Slightly white alabastrum(diploid) 310.224
CNS0095595Whole white alabastrum(diploid) 28.156
CNS0095596Whole white alabastrum(diploid) 37.092
CNS0095597Whole white alabastrum(diploid) 48.524
CNS0095598Silvery flower (diploied) 110.229
CNS0095599Silvery flower (diploied) 213.130
CNS0095600Silvery flower (diploied) 39.623
CNS0095601Golden flower (diploid) 113.247
CNS0095602Golden flower (diploid) 28.227
CNS0095603Golden flower (diploid) 37.242
CNS0095604Slightly white alabastrum(tetraploid) 18.105
CNS0095605Slightly white alabastrum(tetraploid) 26.374
CNS0095606Slightly white alabastrum(tetraploid) 310.050
CNS0095607Whole white alabastrum(tetraploid) 16.571
CNS0095608Whole white alabastrum(tetraploid) 25.526
CNS0095609Whole white alabastrum(tetraploid) 38.656
CNS0095610Silvery flower (tetraploid) 16.568
CNS0095611Silvery flower (tetraploid) 26.345
CNS0095612Silvery flower (tetraploid) 36.409
CNS0095613Golden flower (tetraploid) 15.879
CNS0095614Golden flower (tetraploid) 25.866
CNS0095615Golden flower (tetraploid) 35.469
CRA001975CRR073297Stem 17.837
CRR073298Stem 25.311
CRR073299Stem 33.186
CRR073300Leaf 16.050
CRR073301Leaf 23.878
CRR073302Leaf 32.109
CRR073303Juvenile bud 17.148
CRR073304Juvenile bud 22.300
CRR073305Juvenile bud 35.271
CRR073306Third green 10.482
CRR073307Third green 21.356
CRR073308Third green 31.361
CRR073309Second white 10.126
CRR073310Second white 20.757
CRR073311Second white 31.146
CRR073312Silver flowering 11.035
CRR073313Silver flowering 20.000
CRR073314Silver flowering 31.086
CRR073315Gold flowering 11.340
CRR073316Gold flowering 23.694
CRR073317Gold flowering 31.128
CRR073318Tawny withering 18.831
CRR073319Tawny withering 27.404
CRR073320Tawny withering 35.248