Detail information of GWHGAAZE011822


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO99049.10unnamed protein product [Coffea canephora]
Swissprottr|Q9SKY8|HSP7H_ARATH0Heat shock 70 kDa protein 8
trEMBLtr|A0A068TSW5|A0A068TSW5_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_3 {ECO:0000313|EMBL:CDO99049.1}
TAIR10AT2G32120.20heat-shock protein 70T-2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7373769173739409-
GWHAAZE00000003mRNA7373769173739409-
GWHAAZE00000003exon7373858173739409-
GWHAAZE00000003exon7373769173738547-
GWHAAZE00000003CDS7373858173739409-
GWHAAZE00000003CDS7373769173738547-
Transcript Sequence

Network for GWHGAAZE011822

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP70285112.60E-87
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09489HSPA4 Tight junction map04530
Antigen processing and presentationmap04612

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.660
SRR3591706second leaf1.446
SRR3591707mature leaf1.244
SRR3591708Shoot apex10.765
SRR3591709Stem10.593
SRR3591710White floral bud5.481
SRR3591711White flower4.474
SRR3591712Green floral bud36.385
SRR3591713Yellow flower1.783
SRP173429 SRR8316895Juvenile bud stage 20.829
SRR8316896Juvenile bud stage 42.934
SRR8316897Juvenile bud stage 12.999
SRR8316894Third green stage 8.761
SRR8316900Third green stage 32.480
SRR8316901Third green stage 23.608
SRR8316898Complete white stage 2.397
SRR8316899Complete white stage 19.918
SRR8316903Complete white stage 5.007
SRR8316902Silver flowering stage1.308
SRR8316904Silver flowering stage1.723
SRR8316905Silver flowering stage0.617
SRR8316906Gold flowering stage 3.073
SRR8316907Gold flowering stage 2.747
SRR8316908Gold flowering stage 2.137
SRP132670SRR6706286Control52.198
SRR6706287Light intensity 50%49.895
SRR6706288Light intensity 20%56.829
CNP0000432CNS0095592Slightly white alabastrum(diploid) 128.602
CNS0095593Slightly white alabastrum(diploid) 226.509
CNS0095594Slightly white alabastrum(diploid) 323.442
CNS0095595Whole white alabastrum(diploid) 225.097
CNS0095596Whole white alabastrum(diploid) 324.494
CNS0095597Whole white alabastrum(diploid) 422.331
CNS0095598Silvery flower (diploied) 112.091
CNS0095599Silvery flower (diploied) 227.122
CNS0095600Silvery flower (diploied) 317.401
CNS0095601Golden flower (diploid) 141.849
CNS0095602Golden flower (diploid) 217.327
CNS0095603Golden flower (diploid) 317.461
CNS0095604Slightly white alabastrum(tetraploid) 133.630
CNS0095605Slightly white alabastrum(tetraploid) 228.003
CNS0095606Slightly white alabastrum(tetraploid) 357.330
CNS0095607Whole white alabastrum(tetraploid) 118.131
CNS0095608Whole white alabastrum(tetraploid) 216.390
CNS0095609Whole white alabastrum(tetraploid) 377.200
CNS0095610Silvery flower (tetraploid) 18.472
CNS0095611Silvery flower (tetraploid) 211.716
CNS0095612Silvery flower (tetraploid) 38.023
CNS0095613Golden flower (tetraploid) 15.990
CNS0095614Golden flower (tetraploid) 26.919
CNS0095615Golden flower (tetraploid) 30.692
CRA001975CRR073297Stem 133.095
CRR073298Stem 230.641
CRR073299Stem 345.903
CRR073300Leaf 135.972
CRR073301Leaf 236.773
CRR073302Leaf 349.214
CRR073303Juvenile bud 145.213
CRR073304Juvenile bud 223.664
CRR073305Juvenile bud 341.758
CRR073306Third green 16.004
CRR073307Third green 25.518
CRR073308Third green 34.313
CRR073309Second white 12.714
CRR073310Second white 21.956
CRR073311Second white 31.703
CRR073312Silver flowering 11.225
CRR073313Silver flowering 23.405
CRR073314Silver flowering 31.954
CRR073315Gold flowering 17.164
CRR073316Gold flowering 29.431
CRR073317Gold flowering 39.102
CRR073318Tawny withering 123.095
CRR073319Tawny withering 211.175
CRR073320Tawny withering 330.711