Detail information of GWHGAAZE011845


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCCG20321.11.15076E-66Ran GTPase activating protein 2 [Solanum stoloniferum]
Swissprottr|Q9M651|RAGP2_ARATH9E-59RAN GTPase-activating protein 2
trEMBLtr|I7J2T9|I7J2T9_9SOLN4E-67Ran GTPase activating protein 2 {ECO:0000313|EMBL:CCG20321.1}
TAIR10AT5G19320.13E-49RAN GTPase activating protein 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7408725774087754+
GWHAAZE00000003mRNA7408725774087754+
GWHAAZE00000003exon7408725774087754+
GWHAAZE00000003CDS7408725774087754+
Transcript Sequence

Network for GWHGAAZE011845

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13943.7WPP1782.00E-20
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K14319RANGAP1 RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.166
SRR3591706second leaf3.367
SRR3591707mature leaf3.281
SRR3591708Shoot apex4.268
SRR3591709Stem1.935
SRR3591710White floral bud3.190
SRR3591711White flower4.078
SRR3591712Green floral bud4.239
SRR3591713Yellow flower1.785
SRP173429 SRR8316895Juvenile bud stage 2.083
SRR8316896Juvenile bud stage 2.802
SRR8316897Juvenile bud stage 0.703
SRR8316894Third green stage 0.540
SRR8316900Third green stage 2.996
SRR8316901Third green stage 2.371
SRR8316898Complete white stage 0.971
SRR8316899Complete white stage 3.769
SRR8316903Complete white stage 2.107
SRR8316902Silver flowering stage1.951
SRR8316904Silver flowering stage1.558
SRR8316905Silver flowering stage1.332
SRR8316906Gold flowering stage 2.981
SRR8316907Gold flowering stage 2.984
SRR8316908Gold flowering stage 2.846
SRP132670SRR6706286Control2.034
SRR6706287Light intensity 50%2.723
SRR6706288Light intensity 20%2.405
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.394
CNS0095593Slightly white alabastrum(diploid) 21.837
CNS0095594Slightly white alabastrum(diploid) 31.550
CNS0095595Whole white alabastrum(diploid) 22.161
CNS0095596Whole white alabastrum(diploid) 31.747
CNS0095597Whole white alabastrum(diploid) 41.251
CNS0095598Silvery flower (diploied) 12.274
CNS0095599Silvery flower (diploied) 22.751
CNS0095600Silvery flower (diploied) 33.630
CNS0095601Golden flower (diploid) 11.645
CNS0095602Golden flower (diploid) 23.215
CNS0095603Golden flower (diploid) 34.334
CNS0095604Slightly white alabastrum(tetraploid) 11.623
CNS0095605Slightly white alabastrum(tetraploid) 21.481
CNS0095606Slightly white alabastrum(tetraploid) 34.916
CNS0095607Whole white alabastrum(tetraploid) 12.726
CNS0095608Whole white alabastrum(tetraploid) 23.356
CNS0095609Whole white alabastrum(tetraploid) 34.259
CNS0095610Silvery flower (tetraploid) 13.654
CNS0095611Silvery flower (tetraploid) 22.125
CNS0095612Silvery flower (tetraploid) 34.960
CNS0095613Golden flower (tetraploid) 11.877
CNS0095614Golden flower (tetraploid) 21.328
CNS0095615Golden flower (tetraploid) 33.066
CRA001975CRR073297Stem 11.769
CRR073298Stem 22.731
CRR073299Stem 31.380
CRR073300Leaf 11.633
CRR073301Leaf 23.000
CRR073302Leaf 32.008
CRR073303Juvenile bud 11.053
CRR073304Juvenile bud 20.812
CRR073305Juvenile bud 31.352
CRR073306Third green 12.156
CRR073307Third green 20.790
CRR073308Third green 31.727
CRR073309Second white 11.445
CRR073310Second white 23.573
CRR073311Second white 32.982
CRR073312Silver flowering 11.846
CRR073313Silver flowering 21.314
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.574
CRR073316Gold flowering 21.975
CRR073317Gold flowering 32.275
CRR073318Tawny withering 10.432
CRR073319Tawny withering 20.759
CRR073320Tawny withering 30.773