Gene detail

Detail information of GWHGAAZE011885

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CDP02334.1	3.72518E-98	unnamed protein product [Coffea canephora]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	2E-90	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A068U2D1\|A0A068U2D1_COFCA	1E-98	Coffea canephora DH200=94 genomic scaffold, scaffold_8 {ECO:0000313\|EMBL:CDP02334.1}
TAIR10	AT3G51550.1	7E-79	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	74731191	74732069	-
GWHAAZE00000003	mRNA	74731191	74732069	-
GWHAAZE00000003	exon	74731191	74732069	-
GWHAAZE00000003	CDS	74731191	74732069	-

Transcript Sequence
>GWHTAAZE011897 ATGCCGATATTGGTTCCGCCGCTGCTGAAGCACTTAAACATGCCGACATTGGATCCGCCTGAGCCATTTTGCCGTCCCTTCTCCCTTGCTGAGATCTTATCCATGACTCACAACTTTAATGAGGCATTGGTTATCGGGCAGGGCGGATTTGGTGAATTATACAAAGGGATCATTGCCAACGAGGCAATTGTTGTTGCTGTAAAAAGGCTGAATTCCACTTCCAAGCATGGAGATTCTGAATTCAGAACTGAGATTGAAATGCTTTCAAAATTTCAACACTCTCATATCGTGTCTATGATCGGTTACTGTTATAGTTCTACTGAGAAGGTACTTGTTTATGAATATATGGTTAACGGGTCTCTAGCGGATCATTTGTACGAAACTGGTAAGTATGCTGGTGGTGCTTTATCTTGGGTGCAGCATCTCAAGATTTGTCTAGGAGCTGCTCGTGTCTTGGACTACCTCCACACGGGTACCGGTGTTCAAGACAGTGTTATACATCGTGATGTCAAGAGTTCGAACATCCTGTTAGACAAAAATTGTGCAGCTAAAGTTTCAGACTTCGGGTTGTCTAGAATAAGCCCAATTGATCAGTCATGCACTCATATCAGCACAAATGTTAAAGGGACAACGGGGTACATGGATCCAGAATATCTGTTGACCCTTAAATTGTCCATGAAATCCGATGTCTACTCTTTTGGGGTTGTACTTTTTGAAGTTTTGTGTGGAAGGCAAACGGTGGATTTAAGGCTTGATGACGAGCAATGGAGTCTTGCTAGGTGGGCCCAACACTGTATTGAAAAAGGAACACTTCATCAGATTATTGATCCTAATTTGAGGTGGGAAATTTTGCCCGAGTCTTGTACAGAATTTGCATGA

Network for GWHGAAZE011885

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	44	246	2.00E-44

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.865
	SRR3591706	second leaf	0.201
	SRR3591707	mature leaf	0.287
	SRR3591708	Shoot apex	0.259
	SRR3591709	Stem	2.495
	SRR3591710	White floral bud	2.336
	SRR3591711	White flower	3.322
	SRR3591712	Green floral bud	0.367
	SRR3591713	Yellow flower	0.578
SRP173429	SRR8316895	Juvenile bud stage	4.465
	SRR8316896	Juvenile bud stage	1.746
	SRR8316897	Juvenile bud stage	0.998
	SRR8316894	Third green stage	0.210
	SRR8316900	Third green stage	0.099
	SRR8316901	Third green stage	0.557
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	2.383
	SRR8316903	Complete white stage	0.123
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.123
	SRR8316905	Silver flowering stage	0.012
	SRR8316906	Gold flowering stage	0.374
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.534
SRP132670	SRR6706286	Control	0.264
	SRR6706287	Light intensity 50%	0.389
	SRR6706288	Light intensity 20%	0.056
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.071
	CNS0095593	Slightly white alabastrum(diploid) 2	2.880
	CNS0095594	Slightly white alabastrum(diploid) 3	2.544
	CNS0095595	Whole white alabastrum(diploid) 2	2.590
	CNS0095596	Whole white alabastrum(diploid) 3	0.245
	CNS0095597	Whole white alabastrum(diploid) 4	3.230
	CNS0095598	Silvery flower (diploied) 1	12.151
	CNS0095599	Silvery flower (diploied) 2	16.719
	CNS0095600	Silvery flower (diploied) 3	4.511
	CNS0095601	Golden flower (diploid) 1	9.764
	CNS0095602	Golden flower (diploid) 2	8.874
	CNS0095603	Golden flower (diploid) 3	9.550
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.097
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.118
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.175
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.264
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.355
	CNS0095613	Golden flower (tetraploid) 1	0.077
	CNS0095614	Golden flower (tetraploid) 2	0.290
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.579
	CRR073298	Stem 2	0.122
	CRR073299	Stem 3	0.073
	CRR073300	Leaf 1	0.155
	CRR073301	Leaf 2	0.458
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.060
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.177
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.102
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.182
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.334
	CRR073317	Gold flowering 3	0.584
	CRR073318	Tawny withering 1	0.103
	CRR073319	Tawny withering 2	0.856
	CRR073320	Tawny withering 3	0.253