Gene detail

Detail information of GWHGAAZE011902

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP24281.1	1.084E-101	hypothetical protein JCGZ_25577 [Jatropha curcas]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	4E-91	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A067JJZ1\|A0A067JJZ1_JATCU	4E-102	Uncharacterized protein {ECO:0000313\|EMBL:KDP24281.1}
TAIR10	AT3G51550.1	7E-82	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	75094415	75096367	+
GWHAAZE00000003	mRNA	75094415	75096367	+
GWHAAZE00000003	exon	75094415	75095513	+
GWHAAZE00000003	exon	75095832	75096367	+
GWHAAZE00000003	CDS	75094415	75095513	+
GWHAAZE00000003	CDS	75095832	75096367	+

Transcript Sequence
>GWHTAAZE011914 TGTTTTTTTTTTATCCGGCCAAAAATGATGGTGCTGCCACCGTTTGTACCAGTAGAGAAATTATGCCGCCCCTTCTCATTCGCTGAGATCTTATCCGCAACTCACAACTTTGATAATTCATTGCTCATCGGCGAGGGAGGATTTGGGCTAGTATACAAAGGGTTCATTGATGACGGGGCAAACATTGTTGCTATAAAACGGTTGAATTCTACGTCCAAGCAAAGAGAATCCCAATTCAGAACCGAGATTGAGATGCTTTCAAAATTCCGACATTCTAATATTGTGTCTCTAGTTGGTTACTGTTATAATTCCAGTGAGATGATCCTTATTTATGAATTTATGAGTAGGGGATCGCTCGCAGATCATCTTTACGAAATATGTGATGACGGTAGTACTGGTTGTGCTTTATCTTGGGTGCAACGCCTCAATATTTGTCTAGGAGCTGCTCGTGGCCTGGATTACCTTCGTACAGGTACATGTACCGATGTTCAAGCCGGCATCATACATCGTGATGTGAAGAGTTCAAACATTTTGTTAGATAAGCATTGGGTAGCCAAAGTTTCAGACTTGGGGCTCTCTAAAACCAACCCAATTAATCAGTCGTTTGTTCACACCCAGGTTAGAGGCACCGCAGGGTACATGGATCCAGAGTATGCATTGACACTTAGATTGAGAATGAAATCCGACACTTTCTCTTTCGGGGTTGTCTTAATTGAAGTGCTGTGGGGAAGGCGAGTGAGCGATTTCAAACTCGGTTACAAGCAATGGGATCTTGCAGAATGGTTGTCACGCTGCATTGAAGAAGGAACACTGCATAAAATCATTGATCGGAATTTGAAGTGGGAAATTTTGCCAAATTCTTTGAATAAGTTTGTGGAAATTGCATGTCAATGTTTGCGTTACTACTCAAAAAAACGCCCTACAATGACCCAAGTTGTGGCCTCACTTGAGTTGGCATTGGCATTACAACTAATGAAGGACTCTTCTATCTTAGCAATGGAGATCTTTGAAAACGAGTATAACGTCGATTCTAGTATTGTACAACAAGAAGCTATCAGAATCGTCAATTACGTAAAGCCTACCAAGAGAAATGCATTAGGGATACAAATGGCTAATGTGAAAAGAAATTGCCAACAATTTGATGCGAACCAAGACAGCGGTATCAACAAAGAAGAAAAGGTGCCAATAATTTACAAAATATGCGATGCCAACCAAGACAGCTGTCTCAACAAAGAAGTCGTGACTATATATAACGGCATATTTGATACCAACCGAGACTGCACTCTCAACAAAGAAGGGTTGATGACTATTGGTAACAAATTTGAGAGGGCGGATTTAATTTTCCGAAATTTCGACATCAATCGAGACAATTTCCTCAGCGCAGAAGAAATAAGAGCCTTGGTCATTGCCCTATACCCTGAAGTCGAGTTCACCAACGAACAGCTAAATTTGCTTGTCAACGAGTTCTTTCAAACCTATAGTTCATATACTGACGGGGAGAAAGGTTTTCTGGGGATTTTCCAGATGTACAACATGGAAAAAGGTCTCACTTTTTCTGGGTTTTGTCAAATGTACGACGACAATGTAAGAGACATTGATCGTGATTTTGCTACACTTTTGGCGTTGAACTCTTGA

Network for GWHGAAZE011902

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	42	314	1.20E-43

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0005509	molecular_function	calcium ion binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.993
	SRR3591706	second leaf	0.082
	SRR3591707	mature leaf	0.358
	SRR3591708	Shoot apex	0.195
	SRR3591709	Stem	1.562
	SRR3591710	White floral bud	0.224
	SRR3591711	White flower	0.502
	SRR3591712	Green floral bud	0.120
	SRR3591713	Yellow flower	0.056
SRP173429	SRR8316895	Juvenile bud stage	0.432
	SRR8316896	Juvenile bud stage	0.166
	SRR8316897	Juvenile bud stage	0.306
	SRR8316894	Third green stage	0.182
	SRR8316900	Third green stage	0.355
	SRR8316901	Third green stage	0.424
	SRR8316898	Complete white stage	0.013
	SRR8316899	Complete white stage	0.782
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.146
	SRR8316904	Silver flowering stage	0.116
	SRR8316905	Silver flowering stage	0.029
	SRR8316906	Gold flowering stage	0.154
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.031
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.266
	CNS0095593	Slightly white alabastrum(diploid) 2	0.535
	CNS0095594	Slightly white alabastrum(diploid) 3	0.481
	CNS0095595	Whole white alabastrum(diploid) 2	0.162
	CNS0095596	Whole white alabastrum(diploid) 3	0.122
	CNS0095597	Whole white alabastrum(diploid) 4	0.047
	CNS0095598	Silvery flower (diploied) 1	0.545
	CNS0095599	Silvery flower (diploied) 2	1.138
	CNS0095600	Silvery flower (diploied) 3	0.946
	CNS0095601	Golden flower (diploid) 1	0.190
	CNS0095602	Golden flower (diploid) 2	0.399
	CNS0095603	Golden flower (diploid) 3	0.310
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.031
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.073
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.101
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.035
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.025
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.065
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.189
	CRR073299	Stem 3	0.090
	CRR073300	Leaf 1	0.059
	CRR073301	Leaf 2	1.079
	CRR073302	Leaf 3	0.127
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.166
	CRR073305	Juvenile bud 3	0.235
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.166
	CRR073308	Third green 3	0.033
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.631
	CRR073316	Gold flowering 2	0.146
	CRR073317	Gold flowering 3	0.083
	CRR073318	Tawny withering 1	0.310
	CRR073319	Tawny withering 2	1.163
	CRR073320	Tawny withering 3	0.960