Gene detail

Detail information of GWHGAAZE011913

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007034624.1	7.93349E-97	Eukaryotic aspartyl protease family protein, putative [Theobroma cacao]
Swissprot	tr\|Q8RVH5\|7SBG2_SOYBN	1E-33	Basic 7S globulin 2 low kDa subunit (Precursor)
trEMBL	tr\|A0A061EKI6\|A0A061EKI6_THECC	3E-97	Eukaryotic aspartyl protease family protein, putative {ECO:0000313\|EMBL:EOY05550.1}
TAIR10	AT1G03220.1	2E-57	Eukaryotic aspartyl protease family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	75218300	75223520	-
GWHAAZE00000003	mRNA	75218300	75223520	-
GWHAAZE00000003	exon	75223398	75223520	-
GWHAAZE00000003	exon	75222622	75222695	-
GWHAAZE00000003	exon	75218300	75219200	-
GWHAAZE00000003	CDS	75223398	75223520	-
GWHAAZE00000003	CDS	75222622	75222695	-
GWHAAZE00000003	CDS	75218300	75219200	-

Transcript Sequence
>GWHTAAZE011925 ATGGCTACAACTCATCGTCCTACCGCCCGATCCCTTGCGGCTTGGGCTGGTGCAAACCCCTTAAGGGCTCAGGCTGCATGGGCTGCAACCTGCCCCCCAGGCCAGGGTGCACCAACAACACATAGTGAGAGTGTGAAGTGGAGGTTTTATGGGGGAAATTATATGGTGAAGGTGAAGAAGGATGTGATGTGCCTAGGGAGGTTGCTCTATGGCGATGGCTATGGCACAGACAAACTGAGGACGCTATCGACGGACGGCCGGTTCGTGTTGACTGGTTACGACTTCAACAGTTATGCATTTTTGTGCGCGGATGTAAGACTGTTGAGAAATTTGGCTAGGCAAACAATAGGGATGATAGGCCTAACAAGATCTAGATCTTCGCTACCTAAACAGTTATCGCTAGCGTTTAAATTGCCTAACAAGTTTGCTCTTTGTCTCCCTTCTTCTTCCAAGAATGGCGTCGGTGACATTTTCATTGGCGGTGGGCCCTATTTTATGCCTCCAGTGATTCAAGACCTCTCTAAATCACTAATCACTACTCCACTTCTTATTAATCCTGTAAGTACTGACCCGTCTGACGAGTATTTCATCGGTGTCAAATCGATCAGAATCGACAGTAAGGTTGTTAGTTTCAACAACTCATTGCTAAGCATTGACAAAAATGGAAACGGGGGCACAAAGTTAAGTACCATAGCCCGGTACACACTTTTGCATGATTCTATCTATAGGGCTTTTGCGGCTGCATTTGTGAAGGCTGCTGCAGCAAAAAATATAAGAAGGGTGGCTCCGGTGAGGCCGTTCGGGGTGTGTTTTAGCATGACGAGGGCCAATGGGAGCGTGCCATATGTCGAATTGGTGCTGCAGAGTGAGAGTGTGAAGTGGAGGTTTTATGAGGCGAGCTCCATGCTTAAGGTGAACAACACGGTGTCTTGTTTAGCGATTCAGAATGGTGGATTGAACCCAAGGACCGCAGTGGTTATAGGTGGGCATCAATTGGAGAATTATCTTTTGGAGTTTGATCTTGTTTCCTCAAACCTTAGGTTCAGCTCTTCTCTTCTGCAAATGAATACAAGCTGTTCACAAAACAGGATTTCTTGA

Network for GWHGAAZE011913

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0078

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14543.7	TAXi_N	74	161	3.30E-14
PF14541.7	TAXi_C	194	349	1.10E-48

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	16.089
	SRR3591706	second leaf	3.183
	SRR3591707	mature leaf	0.729
	SRR3591708	Shoot apex	28.912
	SRR3591709	Stem	0.417
	SRR3591710	White floral bud	0.534
	SRR3591711	White flower	0.381
	SRR3591712	Green floral bud	0.920
	SRR3591713	Yellow flower	2.486
SRP173429	SRR8316895	Juvenile bud stage	5.459
	SRR8316896	Juvenile bud stage	5.055
	SRR8316897	Juvenile bud stage	2.795
	SRR8316894	Third green stage	3.566
	SRR8316900	Third green stage	2.338
	SRR8316901	Third green stage	3.570
	SRR8316898	Complete white stage	4.390
	SRR8316899	Complete white stage	3.584
	SRR8316903	Complete white stage	3.317
	SRR8316902	Silver flowering stage	2.417
	SRR8316904	Silver flowering stage	3.991
	SRR8316905	Silver flowering stage	1.404
	SRR8316906	Gold flowering stage	34.777
	SRR8316907	Gold flowering stage	14.835
	SRR8316908	Gold flowering stage	18.592
SRP132670	SRR6706286	Control	8.009
	SRR6706287	Light intensity 50%	6.352
	SRR6706288	Light intensity 20%	3.214
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.572
	CNS0095593	Slightly white alabastrum(diploid) 2	9.491
	CNS0095594	Slightly white alabastrum(diploid) 3	9.661
	CNS0095595	Whole white alabastrum(diploid) 2	1.971
	CNS0095596	Whole white alabastrum(diploid) 3	1.051
	CNS0095597	Whole white alabastrum(diploid) 4	2.791
	CNS0095598	Silvery flower (diploied) 1	2.728
	CNS0095599	Silvery flower (diploied) 2	1.377
	CNS0095600	Silvery flower (diploied) 3	6.922
	CNS0095601	Golden flower (diploid) 1	10.443
	CNS0095602	Golden flower (diploid) 2	12.390
	CNS0095603	Golden flower (diploid) 3	12.245
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.573
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.338
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.682
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.119
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.035
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.201
	CNS0095610	Silvery flower (tetraploid) 1	0.632
	CNS0095611	Silvery flower (tetraploid) 2	0.092
	CNS0095612	Silvery flower (tetraploid) 3	0.610
	CNS0095613	Golden flower (tetraploid) 1	2.292
	CNS0095614	Golden flower (tetraploid) 2	7.134
	CNS0095615	Golden flower (tetraploid) 3	0.888
CRA001975	CRR073297	Stem 1	15.612
	CRR073298	Stem 2	9.937
	CRR073299	Stem 3	13.764
	CRR073300	Leaf 1	2.922
	CRR073301	Leaf 2	4.265
	CRR073302	Leaf 3	5.008
	CRR073303	Juvenile bud 1	1.977
	CRR073304	Juvenile bud 2	3.182
	CRR073305	Juvenile bud 3	7.040
	CRR073306	Third green 1	0.037
	CRR073307	Third green 2	0.162
	CRR073308	Third green 3	0.625
	CRR073309	Second white 1	2.726
	CRR073310	Second white 2	1.595
	CRR073311	Second white 3	2.460
	CRR073312	Silver flowering 1	49.542
	CRR073313	Silver flowering 2	34.744
	CRR073314	Silver flowering 3	30.207
	CRR073315	Gold flowering 1	0.392
	CRR073316	Gold flowering 2	0.931
	CRR073317	Gold flowering 3	6.464
	CRR073318	Tawny withering 1	1.705
	CRR073319	Tawny withering 2	13.580
	CRR073320	Tawny withering 3	1.034