Detail information of GWHGAAZE011951


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002280327.11.4198E-110PREDICTED: transmembrane protein 64 [Vitis vinifera]
trEMBLtr|D7T6R2|D7T6R2_VITVI5E-111Putative uncharacterized protein {ECO:0000313|EMBL:CBI26183.3}
TAIR10AT5G19070.15E-68SNARE associated Golgi protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7615596676162304+
GWHAAZE00000003mRNA7615596676162304+
GWHAAZE00000003exon7615596676156061+
GWHAAZE00000003exon7615797776158038+
GWHAAZE00000003exon7615975676159810+
GWHAAZE00000003exon7616031176160409+
GWHAAZE00000003exon7616078276160868+
GWHAAZE00000003exon7616126176161377+
GWHAAZE00000003exon7616212276162304+
GWHAAZE00000003CDS7615596676156061+
GWHAAZE00000003CDS7615797776158038+
GWHAAZE00000003CDS7615975676159810+
GWHAAZE00000003CDS7616031176160409+
GWHAAZE00000003CDS7616078276160868+
GWHAAZE00000003CDS7616126176161377+
GWHAAZE00000003CDS7616212276162304+
Transcript Sequence

Network for GWHGAAZE011951

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0190


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09335.12SNARE_assoc651837.30E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf70.558
SRR3591706second leaf42.249
SRR3591707mature leaf54.271
SRR3591708Shoot apex37.356
SRR3591709Stem176.173
SRR3591710White floral bud68.682
SRR3591711White flower72.616
SRR3591712Green floral bud39.961
SRR3591713Yellow flower73.435
SRP173429 SRR8316895Juvenile bud stage 18.607
SRR8316896Juvenile bud stage 32.104
SRR8316897Juvenile bud stage 13.685
SRR8316894Third green stage 12.429
SRR8316900Third green stage 32.100
SRR8316901Third green stage 28.972
SRR8316898Complete white stage 19.636
SRR8316899Complete white stage 49.603
SRR8316903Complete white stage 33.488
SRR8316902Silver flowering stage26.694
SRR8316904Silver flowering stage31.490
SRR8316905Silver flowering stage14.789
SRR8316906Gold flowering stage 66.945
SRR8316907Gold flowering stage 59.239
SRR8316908Gold flowering stage 70.654
SRP132670SRR6706286Control21.237
SRR6706287Light intensity 50%22.820
SRR6706288Light intensity 20%24.448
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.086
CNS0095593Slightly white alabastrum(diploid) 226.956
CNS0095594Slightly white alabastrum(diploid) 322.243
CNS0095595Whole white alabastrum(diploid) 227.918
CNS0095596Whole white alabastrum(diploid) 325.628
CNS0095597Whole white alabastrum(diploid) 428.160
CNS0095598Silvery flower (diploied) 144.771
CNS0095599Silvery flower (diploied) 229.549
CNS0095600Silvery flower (diploied) 353.504
CNS0095601Golden flower (diploid) 136.205
CNS0095602Golden flower (diploid) 253.402
CNS0095603Golden flower (diploid) 353.270
CNS0095604Slightly white alabastrum(tetraploid) 132.918
CNS0095605Slightly white alabastrum(tetraploid) 230.941
CNS0095606Slightly white alabastrum(tetraploid) 333.477
CNS0095607Whole white alabastrum(tetraploid) 128.848
CNS0095608Whole white alabastrum(tetraploid) 235.091
CNS0095609Whole white alabastrum(tetraploid) 330.493
CNS0095610Silvery flower (tetraploid) 147.347
CNS0095611Silvery flower (tetraploid) 261.535
CNS0095612Silvery flower (tetraploid) 342.110
CNS0095613Golden flower (tetraploid) 130.392
CNS0095614Golden flower (tetraploid) 238.330
CNS0095615Golden flower (tetraploid) 353.442
CRA001975CRR073297Stem 122.546
CRR073298Stem 221.844
CRR073299Stem 327.868
CRR073300Leaf 123.451
CRR073301Leaf 223.423
CRR073302Leaf 326.128
CRR073303Juvenile bud 125.878
CRR073304Juvenile bud 221.277
CRR073305Juvenile bud 329.563
CRR073306Third green 120.673
CRR073307Third green 218.374
CRR073308Third green 314.433
CRR073309Second white 133.762
CRR073310Second white 232.016
CRR073311Second white 326.149
CRR073312Silver flowering 125.537
CRR073313Silver flowering 226.656
CRR073314Silver flowering 317.847
CRR073315Gold flowering 144.688
CRR073316Gold flowering 246.113
CRR073317Gold flowering 351.106
CRR073318Tawny withering 127.365
CRR073319Tawny withering 227.382
CRR073320Tawny withering 334.051