Detail information of GWHGAAZE012061


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO99166.10unnamed protein product [Coffea canephora]
trEMBLtr|A0A068TSF1|A0A068TSF1_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_3 {ECO:0000313|EMBL:CDO99166.1}
TAIR10AT1G06750.19E-138P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7937616979385902-
GWHAAZE00000003mRNA7937616979385902-
GWHAAZE00000003exon7938589379385902-
GWHAAZE00000003exon7938559779385791-
GWHAAZE00000003exon7938395579384178-
GWHAAZE00000003exon7937941279379662-
GWHAAZE00000003exon7937842979378558-
GWHAAZE00000003exon7937784379378168-
GWHAAZE00000003exon7937694879377087-
GWHAAZE00000003exon7937616979376401-
GWHAAZE00000003CDS7938589379385902-
GWHAAZE00000003CDS7938559779385791-
GWHAAZE00000003CDS7938395579384178-
GWHAAZE00000003CDS7937941279379662-
GWHAAZE00000003CDS7937842979378558-
GWHAAZE00000003CDS7937784379378168-
GWHAAZE00000003CDS7937694879377087-
GWHAAZE00000003CDS7937616979376401-
Transcript Sequence

Network for GWHGAAZE012061

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0214


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06414.13Zeta_toxin1993133.20E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005524molecular_functionATP binding
GO:0016301molecular_functionkinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.100
SRR3591706second leaf16.172
SRR3591707mature leaf16.194
SRR3591708Shoot apex31.983
SRR3591709Stem9.534
SRR3591710White floral bud7.003
SRR3591711White flower9.006
SRR3591712Green floral bud6.529
SRR3591713Yellow flower9.209
SRP173429 SRR8316895Juvenile bud stage 4.473
SRR8316896Juvenile bud stage 5.877
SRR8316897Juvenile bud stage 3.372
SRR8316894Third green stage 1.455
SRR8316900Third green stage 2.970
SRR8316901Third green stage 3.427
SRR8316898Complete white stage 1.176
SRR8316899Complete white stage 13.692
SRR8316903Complete white stage 1.687
SRR8316902Silver flowering stage0.512
SRR8316904Silver flowering stage0.507
SRR8316905Silver flowering stage0.392
SRR8316906Gold flowering stage 1.524
SRR8316907Gold flowering stage 1.015
SRR8316908Gold flowering stage 1.875
SRP132670SRR6706286Control12.591
SRR6706287Light intensity 50%8.311
SRR6706288Light intensity 20%8.164
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.707
CNS0095593Slightly white alabastrum(diploid) 24.834
CNS0095594Slightly white alabastrum(diploid) 35.298
CNS0095595Whole white alabastrum(diploid) 23.072
CNS0095596Whole white alabastrum(diploid) 31.720
CNS0095597Whole white alabastrum(diploid) 43.554
CNS0095598Silvery flower (diploied) 17.144
CNS0095599Silvery flower (diploied) 24.687
CNS0095600Silvery flower (diploied) 33.685
CNS0095601Golden flower (diploid) 17.866
CNS0095602Golden flower (diploid) 26.168
CNS0095603Golden flower (diploid) 35.195
CNS0095604Slightly white alabastrum(tetraploid) 13.699
CNS0095605Slightly white alabastrum(tetraploid) 25.151
CNS0095606Slightly white alabastrum(tetraploid) 310.619
CNS0095607Whole white alabastrum(tetraploid) 13.505
CNS0095608Whole white alabastrum(tetraploid) 22.388
CNS0095609Whole white alabastrum(tetraploid) 34.998
CNS0095610Silvery flower (tetraploid) 15.558
CNS0095611Silvery flower (tetraploid) 25.369
CNS0095612Silvery flower (tetraploid) 32.378
CNS0095613Golden flower (tetraploid) 11.848
CNS0095614Golden flower (tetraploid) 22.392
CNS0095615Golden flower (tetraploid) 31.162
CRA001975CRR073297Stem 18.369
CRR073298Stem 26.171
CRR073299Stem 36.738
CRR073300Leaf 14.201
CRR073301Leaf 25.179
CRR073302Leaf 33.888
CRR073303Juvenile bud 14.161
CRR073304Juvenile bud 22.423
CRR073305Juvenile bud 35.329
CRR073306Third green 10.263
CRR073307Third green 20.310
CRR073308Third green 30.535
CRR073309Second white 10.291
CRR073310Second white 20.265
CRR073311Second white 30.220
CRR073312Silver flowering 10.249
CRR073313Silver flowering 20.596
CRR073314Silver flowering 30.173
CRR073315Gold flowering 17.720
CRR073316Gold flowering 29.974
CRR073317Gold flowering 38.496
CRR073318Tawny withering 111.912
CRR073319Tawny withering 210.976
CRR073320Tawny withering 310.849