Detail information of GWHGAAZE012130


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002315542.11.26308E-74hypothetical protein POPTR_0010s02840g [Populus trichocarpa]
trEMBLtr|B9HYA2|B9HYA2_POPTR5E-75Uncharacterized protein {ECO:0000313|EMBL:EEF01713.1}
TAIR10AT3G21550.17E-37DUF679 domain membrane protein 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8066152380662002-
GWHAAZE00000003mRNA8066152380662002-
GWHAAZE00000003exon8066152380662002-
GWHAAZE00000003CDS8066152380662002-
Transcript Sequence

Network for GWHGAAZE012130

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0191


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05078.13DUF67911456.00E-51
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.876
SRR3591706second leaf15.894
SRR3591707mature leaf5.969
SRR3591708Shoot apex3.574
SRR3591709Stem97.351
SRR3591710White floral bud175.215
SRR3591711White flower20.968
SRR3591712Green floral bud90.049
SRR3591713Yellow flower62.893
SRP173429 SRR8316895Juvenile bud stage 107.398
SRR8316896Juvenile bud stage 280.930
SRR8316897Juvenile bud stage 40.745
SRR8316894Third green stage 148.508
SRR8316900Third green stage 70.133
SRR8316901Third green stage 241.252
SRR8316898Complete white stage 7.351
SRR8316899Complete white stage 9.944
SRR8316903Complete white stage 8.036
SRR8316902Silver flowering stage7.827
SRR8316904Silver flowering stage4.668
SRR8316905Silver flowering stage1.175
SRR8316906Gold flowering stage 5.020
SRR8316907Gold flowering stage 33.722
SRR8316908Gold flowering stage 3.637
SRP132670SRR6706286Control150.409
SRR6706287Light intensity 50%144.027
SRR6706288Light intensity 20%51.376
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1255.749
CNS0095593Slightly white alabastrum(diploid) 2102.528
CNS0095594Slightly white alabastrum(diploid) 3821.734
CNS0095595Whole white alabastrum(diploid) 25.583
CNS0095596Whole white alabastrum(diploid) 35.572
CNS0095597Whole white alabastrum(diploid) 42.665
CNS0095598Silvery flower (diploied) 16.565
CNS0095599Silvery flower (diploied) 25.442
CNS0095600Silvery flower (diploied) 38.312
CNS0095601Golden flower (diploid) 11.323
CNS0095602Golden flower (diploid) 215.119
CNS0095603Golden flower (diploid) 315.379
CNS0095604Slightly white alabastrum(tetraploid) 180.620
CNS0095605Slightly white alabastrum(tetraploid) 291.117
CNS0095606Slightly white alabastrum(tetraploid) 323.237
CNS0095607Whole white alabastrum(tetraploid) 10.481
CNS0095608Whole white alabastrum(tetraploid) 20.059
CNS0095609Whole white alabastrum(tetraploid) 332.306
CNS0095610Silvery flower (tetraploid) 16.738
CNS0095611Silvery flower (tetraploid) 26.678
CNS0095612Silvery flower (tetraploid) 38.086
CNS0095613Golden flower (tetraploid) 16.692
CNS0095614Golden flower (tetraploid) 26.550
CNS0095615Golden flower (tetraploid) 354.333
CRA001975CRR073297Stem 1228.132
CRR073298Stem 2596.150
CRR073299Stem 3299.771
CRR073300Leaf 155.959
CRR073301Leaf 249.379
CRR073302Leaf 3160.046
CRR073303Juvenile bud 13.691
CRR073304Juvenile bud 297.939
CRR073305Juvenile bud 32.791
CRR073306Third green 11.558
CRR073307Third green 224.656
CRR073308Third green 35.035
CRR073309Second white 14.232
CRR073310Second white 21.859
CRR073311Second white 32.094
CRR073312Silver flowering 114.410
CRR073313Silver flowering 221.210
CRR073314Silver flowering 320.354
CRR073315Gold flowering 11.017
CRR073316Gold flowering 20.186
CRR073317Gold flowering 30.430
CRR073318Tawny withering 128.297
CRR073319Tawny withering 231.623
CRR073320Tawny withering 325.185