Detail information of GWHGAAZE012236


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAIL29217.10fatty acid beta-oxidation multifunctional protein [Camellia oleifera]
Swissprottr|Q39659|MFPA_CUCSA03-hydroxyacyl-CoA dehydrogenase
trEMBLtr|A0A077DAS1|A0A077DAS1_9ERIC0Fatty acid beta-oxidation multifunctional protein {ECO:0000313|EMBL:AIL29217.1}
TAIR10AT3G06860.10multifunctional protein 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8221317782219084-
GWHAAZE00000003mRNA8221317782219084-
GWHAAZE00000003exon8221901582219084-
GWHAAZE00000003exon8221886182218926-
GWHAAZE00000003exon8221872282218778-
GWHAAZE00000003exon8221854182218608-
GWHAAZE00000003exon8221838382218464-
GWHAAZE00000003exon8221736782217422-
GWHAAZE00000003exon8221695382217255-
GWHAAZE00000003exon8221655282216638-
GWHAAZE00000003exon8221591182216085-
GWHAAZE00000003exon8221569682215817-
GWHAAZE00000003exon8221540982215572-
GWHAAZE00000003exon8221494582215199-
GWHAAZE00000003exon8221473182214852-
GWHAAZE00000003exon8221450182214622-
GWHAAZE00000003exon8221391382214061-
GWHAAZE00000003exon8221368882213826-
GWHAAZE00000003exon8221317782213504-
GWHAAZE00000003CDS8221901582219084-
GWHAAZE00000003CDS8221886182218926-
GWHAAZE00000003CDS8221872282218778-
GWHAAZE00000003CDS8221854182218608-
GWHAAZE00000003CDS8221838382218464-
GWHAAZE00000003CDS8221736782217422-
GWHAAZE00000003CDS8221695382217255-
GWHAAZE00000003CDS8221655282216638-
GWHAAZE00000003CDS8221591182216085-
GWHAAZE00000003CDS8221569682215817-
GWHAAZE00000003CDS8221540982215572-
GWHAAZE00000003CDS8221494582215199-
GWHAAZE00000003CDS8221473182214852-
GWHAAZE00000003CDS8221450182214622-
GWHAAZE00000003CDS8221391382214061-
GWHAAZE00000003CDS8221368882213826-
GWHAAZE00000003CDS8221346982213504-
GWHAAZE00000003three_prime_UTR8221317782213468-
Transcript Sequence

Network for GWHGAAZE012236

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00378.21ECH_1101801.10E-35
PF02737.193HCDH_N2794576.70E-61
PF00725.233HCDH4605532.00E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10527MFP2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592

Gene Ontology

GO term OntologyName
GO:0006631biological_processfatty acid metabolic process
GO:0055114biological_processoxidation-reduction process
GO:0003857molecular_function3-hydroxyacyl-CoA dehydrogenase activity
GO:0016491molecular_functionoxidoreductase activity
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf69.958
SRR3591706second leaf70.865
SRR3591707mature leaf46.296
SRR3591708Shoot apex78.381
SRR3591709Stem59.008
SRR3591710White floral bud77.947
SRR3591711White flower95.199
SRR3591712Green floral bud90.747
SRR3591713Yellow flower120.959
SRP173429 SRR8316895Juvenile bud stage 61.814
SRR8316896Juvenile bud stage 82.697
SRR8316897Juvenile bud stage 41.965
SRR8316894Third green stage 30.954
SRR8316900Third green stage 90.101
SRR8316901Third green stage 81.012
SRR8316898Complete white stage 27.979
SRR8316899Complete white stage 70.786
SRR8316903Complete white stage 54.975
SRR8316902Silver flowering stage34.555
SRR8316904Silver flowering stage53.377
SRR8316905Silver flowering stage23.571
SRR8316906Gold flowering stage 84.165
SRR8316907Gold flowering stage 91.427
SRR8316908Gold flowering stage 97.311
SRP132670SRR6706286Control97.734
SRR6706287Light intensity 50%89.948
SRR6706288Light intensity 20%90.869
CNP0000432CNS0095592Slightly white alabastrum(diploid) 161.890
CNS0095593Slightly white alabastrum(diploid) 254.820
CNS0095594Slightly white alabastrum(diploid) 361.297
CNS0095595Whole white alabastrum(diploid) 256.208
CNS0095596Whole white alabastrum(diploid) 364.060
CNS0095597Whole white alabastrum(diploid) 455.792
CNS0095598Silvery flower (diploied) 175.546
CNS0095599Silvery flower (diploied) 272.425
CNS0095600Silvery flower (diploied) 3110.570
CNS0095601Golden flower (diploid) 175.950
CNS0095602Golden flower (diploid) 2130.013
CNS0095603Golden flower (diploid) 3127.946
CNS0095604Slightly white alabastrum(tetraploid) 174.368
CNS0095605Slightly white alabastrum(tetraploid) 269.369
CNS0095606Slightly white alabastrum(tetraploid) 387.832
CNS0095607Whole white alabastrum(tetraploid) 151.656
CNS0095608Whole white alabastrum(tetraploid) 251.388
CNS0095609Whole white alabastrum(tetraploid) 3102.943
CNS0095610Silvery flower (tetraploid) 1115.900
CNS0095611Silvery flower (tetraploid) 2115.734
CNS0095612Silvery flower (tetraploid) 3102.862
CNS0095613Golden flower (tetraploid) 179.453
CNS0095614Golden flower (tetraploid) 2130.862
CNS0095615Golden flower (tetraploid) 397.664
CRA001975CRR073297Stem 1108.158
CRR073298Stem 292.495
CRR073299Stem 389.315
CRR073300Leaf 184.507
CRR073301Leaf 284.261
CRR073302Leaf 375.397
CRR073303Juvenile bud 180.071
CRR073304Juvenile bud 255.939
CRR073305Juvenile bud 395.835
CRR073306Third green 133.593
CRR073307Third green 226.841
CRR073308Third green 334.828
CRR073309Second white 157.602
CRR073310Second white 261.227
CRR073311Second white 371.371
CRR073312Silver flowering 170.695
CRR073313Silver flowering 263.531
CRR073314Silver flowering 376.657
CRR073315Gold flowering 136.093
CRR073316Gold flowering 243.083
CRR073317Gold flowering 335.952
CRR073318Tawny withering 153.310
CRR073319Tawny withering 244.012
CRR073320Tawny withering 342.272