Detail information of GWHGAAZE012264


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009777963.14.82595E-85PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Nicotiana sylvestris]
Swissprottr|Q84J70|DI193_ARATH1E-56Protein DEHYDRATION-INDUCED 19 homolog 3
trEMBLtr|A0A067FWP6|A0A067FWP6_CITSI2E-78Uncharacterized protein {ECO:0000313|EMBL:KDO71814.1}
TAIR10AT3G05700.12E-46Drought-responsive family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8266327082665993-
GWHAAZE00000003mRNA8266327082665993-
GWHAAZE00000003exon8266327082663603-
GWHAAZE00000003exon8266381382663907-
GWHAAZE00000003exon8266561882665760-
GWHAAZE00000003exon8266593382665993-
GWHAAZE00000003CDS8266593382665993-
GWHAAZE00000003CDS8266561882665760-
GWHAAZE00000003CDS8266381382663907-
GWHAAZE00000003CDS8266327082663603-
Transcript Sequence

Network for GWHGAAZE012264

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05605.13zf-Di1938901.30E-21
PF14571.7Di19_C1261992.70E-21
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf211.714
SRR3591706second leaf145.808
SRR3591707mature leaf226.726
SRR3591708Shoot apex229.953
SRR3591709Stem334.851
SRR3591710White floral bud214.160
SRR3591711White flower214.730
SRR3591712Green floral bud243.893
SRR3591713Yellow flower279.815
SRP173429 SRR8316895Juvenile bud stage 142.105
SRR8316896Juvenile bud stage 205.937
SRR8316897Juvenile bud stage 91.284
SRR8316894Third green stage 64.428
SRR8316900Third green stage 183.775
SRR8316901Third green stage 186.778
SRR8316898Complete white stage 67.870
SRR8316899Complete white stage 281.638
SRR8316903Complete white stage 103.127
SRR8316902Silver flowering stage75.746
SRR8316904Silver flowering stage77.296
SRR8316905Silver flowering stage43.160
SRR8316906Gold flowering stage 199.381
SRR8316907Gold flowering stage 167.223
SRR8316908Gold flowering stage 206.407
SRP132670SRR6706286Control313.047
SRR6706287Light intensity 50%275.007
SRR6706288Light intensity 20%283.646
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1255.746
CNS0095593Slightly white alabastrum(diploid) 2232.469
CNS0095594Slightly white alabastrum(diploid) 3244.276
CNS0095595Whole white alabastrum(diploid) 2245.002
CNS0095596Whole white alabastrum(diploid) 3260.768
CNS0095597Whole white alabastrum(diploid) 4260.220
CNS0095598Silvery flower (diploied) 1375.217
CNS0095599Silvery flower (diploied) 2327.925
CNS0095600Silvery flower (diploied) 3225.557
CNS0095601Golden flower (diploid) 1422.440
CNS0095602Golden flower (diploid) 2363.692
CNS0095603Golden flower (diploid) 3359.247
CNS0095604Slightly white alabastrum(tetraploid) 1247.805
CNS0095605Slightly white alabastrum(tetraploid) 2255.641
CNS0095606Slightly white alabastrum(tetraploid) 3284.797
CNS0095607Whole white alabastrum(tetraploid) 1258.115
CNS0095608Whole white alabastrum(tetraploid) 2230.592
CNS0095609Whole white alabastrum(tetraploid) 3268.570
CNS0095610Silvery flower (tetraploid) 1210.377
CNS0095611Silvery flower (tetraploid) 2318.365
CNS0095612Silvery flower (tetraploid) 3192.399
CNS0095613Golden flower (tetraploid) 1219.852
CNS0095614Golden flower (tetraploid) 2265.092
CNS0095615Golden flower (tetraploid) 3221.627
CRA001975CRR073297Stem 1313.019
CRR073298Stem 2270.316
CRR073299Stem 3252.299
CRR073300Leaf 1274.203
CRR073301Leaf 2278.837
CRR073302Leaf 3319.119
CRR073303Juvenile bud 1245.575
CRR073304Juvenile bud 2221.830
CRR073305Juvenile bud 3176.814
CRR073306Third green 1109.711
CRR073307Third green 2142.480
CRR073308Third green 3116.135
CRR073309Second white 1106.585
CRR073310Second white 2113.829
CRR073311Second white 365.803
CRR073312Silver flowering 196.022
CRR073313Silver flowering 2133.309
CRR073314Silver flowering 3100.848
CRR073315Gold flowering 1239.159
CRR073316Gold flowering 2201.882
CRR073317Gold flowering 3229.859
CRR073318Tawny withering 1207.461
CRR073319Tawny withering 2206.724
CRR073320Tawny withering 3159.399