Detail information of GWHGAAZE012299


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006419372.14.8379E-166hypothetical protein CICLE_v10005645mg [Citrus clementina]
Swissprottr|Q8GYN9|MENB_ARATH2E-271,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal
trEMBLtr|V4RXX7|V4RXX7_9ROSI2E-166Uncharacterized protein {ECO:0000313|EMBL:ESR32612.1}
TAIR10AT4G16210.13E-117enoyl-CoA hydratase/isomerase A

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8320995583212800+
GWHAAZE00000003mRNA8320995583212800+
GWHAAZE00000003exon8320995583210457+
GWHAAZE00000003exon8321166383211945+
GWHAAZE00000003exon8321269683212800+
GWHAAZE00000003CDS8320995583210457+
GWHAAZE00000003CDS8321166383211945+
GWHAAZE00000003CDS8321269683212800+
Transcript Sequence

Network for GWHGAAZE012299

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00378.21ECH_1482845.60E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01692paaF, echA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Fatty acid metabolismmap01212
Propanoate metabolismmap00640
Butanoate metabolismmap00650
Fatty acid degradationmap00071
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Phenylalanine metabolismmap00360
Tryptophan metabolismmap00380
beta-Alanine metabolismmap00410
Limonene and pinene degradationmap00903
Geraniol degradationmap00281
Benzoate degradationmap00362
Aminobenzoate degradationmap00627
Caprolactam degradationmap00930

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf44.824
SRR3591706second leaf19.738
SRR3591707mature leaf16.368
SRR3591708Shoot apex42.153
SRR3591709Stem45.391
SRR3591710White floral bud34.549
SRR3591711White flower33.842
SRR3591712Green floral bud31.833
SRR3591713Yellow flower39.865
SRP173429 SRR8316895Juvenile bud stage 42.746
SRR8316896Juvenile bud stage 54.340
SRR8316897Juvenile bud stage 26.755
SRR8316894Third green stage 21.921
SRR8316900Third green stage 77.018
SRR8316901Third green stage 70.688
SRR8316898Complete white stage 44.654
SRR8316899Complete white stage 78.547
SRR8316903Complete white stage 54.452
SRR8316902Silver flowering stage27.196
SRR8316904Silver flowering stage34.095
SRR8316905Silver flowering stage20.519
SRR8316906Gold flowering stage 67.622
SRR8316907Gold flowering stage 77.442
SRR8316908Gold flowering stage 78.455
SRP132670SRR6706286Control89.592
SRR6706287Light intensity 50%80.690
SRR6706288Light intensity 20%89.823
CNP0000432CNS0095592Slightly white alabastrum(diploid) 171.817
CNS0095593Slightly white alabastrum(diploid) 265.686
CNS0095594Slightly white alabastrum(diploid) 372.773
CNS0095595Whole white alabastrum(diploid) 277.348
CNS0095596Whole white alabastrum(diploid) 388.585
CNS0095597Whole white alabastrum(diploid) 472.476
CNS0095598Silvery flower (diploied) 180.967
CNS0095599Silvery flower (diploied) 284.082
CNS0095600Silvery flower (diploied) 380.396
CNS0095601Golden flower (diploid) 194.904
CNS0095602Golden flower (diploid) 288.253
CNS0095603Golden flower (diploid) 384.626
CNS0095604Slightly white alabastrum(tetraploid) 166.340
CNS0095605Slightly white alabastrum(tetraploid) 257.179
CNS0095606Slightly white alabastrum(tetraploid) 350.374
CNS0095607Whole white alabastrum(tetraploid) 162.439
CNS0095608Whole white alabastrum(tetraploid) 261.564
CNS0095609Whole white alabastrum(tetraploid) 362.141
CNS0095610Silvery flower (tetraploid) 169.259
CNS0095611Silvery flower (tetraploid) 291.289
CNS0095612Silvery flower (tetraploid) 375.184
CNS0095613Golden flower (tetraploid) 166.284
CNS0095614Golden flower (tetraploid) 284.278
CNS0095615Golden flower (tetraploid) 384.418
CRA001975CRR073297Stem 150.797
CRR073298Stem 245.812
CRR073299Stem 371.044
CRR073300Leaf 146.125
CRR073301Leaf 244.197
CRR073302Leaf 363.432
CRR073303Juvenile bud 151.974
CRR073304Juvenile bud 254.674
CRR073305Juvenile bud 347.052
CRR073306Third green 137.887
CRR073307Third green 239.584
CRR073308Third green 332.048
CRR073309Second white 138.510
CRR073310Second white 229.092
CRR073311Second white 322.368
CRR073312Silver flowering 124.633
CRR073313Silver flowering 228.869
CRR073314Silver flowering 319.313
CRR073315Gold flowering 135.146
CRR073316Gold flowering 231.119
CRR073317Gold flowering 329.845
CRR073318Tawny withering 140.351
CRR073319Tawny withering 231.429
CRR073320Tawny withering 335.120