Detail information of GWHGAAZE012424


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010108695.16.2343E-42Cell division cycle and apoptosis regulator protein 1 [Morus notabilis]
Swissprottr|A3E4D8|CALM_PROMN0.0000006Calmodulin
trEMBLtr|W9SAX1|W9SAX1_9ROSA2E-42Cell division cycle and apoptosis regulator protein 1 {ECO:0000313|EMBL:EXC20006.1}
TAIR10AT2G03150.15E-32ATP/GTP-binding protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8523747785240674+
GWHAAZE00000003mRNA8523747785240674+
GWHAAZE00000003exon8523747785237978+
GWHAAZE00000003exon8523812385238197+
GWHAAZE00000003exon8523839185238465+
GWHAAZE00000003exon8523861385238819+
GWHAAZE00000003exon8523975285240131+
GWHAAZE00000003exon8524023285240273+
GWHAAZE00000003exon8524036785240429+
GWHAAZE00000003exon8524058585240674+
GWHAAZE00000003five_prime_UTR8523747785237978+
GWHAAZE00000003five_prime_UTR8523812385238197+
GWHAAZE00000003five_prime_UTR8523839185238465+
GWHAAZE00000003five_prime_UTR8523861385238819+
GWHAAZE00000003five_prime_UTR8523975285239903+
GWHAAZE00000003CDS8523990485240131+
GWHAAZE00000003CDS8524023285240273+
GWHAAZE00000003CDS8524036785240429+
GWHAAZE00000003CDS8524058585240674+
Transcript Sequence

Network for GWHGAAZE012424

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0193


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005509molecular_functioncalcium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf49.259
SRR3591706second leaf20.987
SRR3591707mature leaf23.635
SRR3591708Shoot apex65.581
SRR3591709Stem41.963
SRR3591710White floral bud47.499
SRR3591711White flower57.726
SRR3591712Green floral bud50.162
SRR3591713Yellow flower37.984
SRP173429 SRR8316895Juvenile bud stage 40.793
SRR8316896Juvenile bud stage 52.647
SRR8316897Juvenile bud stage 31.343
SRR8316894Third green stage 21.482
SRR8316900Third green stage 50.571
SRR8316901Third green stage 49.773
SRR8316898Complete white stage 11.118
SRR8316899Complete white stage 43.383
SRR8316903Complete white stage 40.530
SRR8316902Silver flowering stage20.281
SRR8316904Silver flowering stage28.149
SRR8316905Silver flowering stage12.513
SRR8316906Gold flowering stage 38.509
SRR8316907Gold flowering stage 37.724
SRR8316908Gold flowering stage 47.878
SRP132670SRR6706286Control51.201
SRR6706287Light intensity 50%45.401
SRR6706288Light intensity 20%45.204
CNP0000432CNS0095592Slightly white alabastrum(diploid) 167.066
CNS0095593Slightly white alabastrum(diploid) 263.947
CNS0095594Slightly white alabastrum(diploid) 370.586
CNS0095595Whole white alabastrum(diploid) 247.897
CNS0095596Whole white alabastrum(diploid) 344.527
CNS0095597Whole white alabastrum(diploid) 442.328
CNS0095598Silvery flower (diploied) 153.453
CNS0095599Silvery flower (diploied) 248.358
CNS0095600Silvery flower (diploied) 326.369
CNS0095601Golden flower (diploid) 147.424
CNS0095602Golden flower (diploid) 225.902
CNS0095603Golden flower (diploid) 329.372
CNS0095604Slightly white alabastrum(tetraploid) 148.088
CNS0095605Slightly white alabastrum(tetraploid) 249.679
CNS0095606Slightly white alabastrum(tetraploid) 356.170
CNS0095607Whole white alabastrum(tetraploid) 135.219
CNS0095608Whole white alabastrum(tetraploid) 228.104
CNS0095609Whole white alabastrum(tetraploid) 339.592
CNS0095610Silvery flower (tetraploid) 151.535
CNS0095611Silvery flower (tetraploid) 227.636
CNS0095612Silvery flower (tetraploid) 341.872
CNS0095613Golden flower (tetraploid) 139.221
CNS0095614Golden flower (tetraploid) 234.527
CNS0095615Golden flower (tetraploid) 327.504
CRA001975CRR073297Stem 178.624
CRR073298Stem 279.263
CRR073299Stem 352.147
CRR073300Leaf 164.985
CRR073301Leaf 268.211
CRR073302Leaf 333.624
CRR073303Juvenile bud 142.414
CRR073304Juvenile bud 227.679
CRR073305Juvenile bud 338.826
CRR073306Third green 126.436
CRR073307Third green 214.223
CRR073308Third green 333.357
CRR073309Second white 17.462
CRR073310Second white 225.988
CRR073311Second white 323.182
CRR073312Silver flowering 115.610
CRR073313Silver flowering 215.428
CRR073314Silver flowering 324.881
CRR073315Gold flowering 113.595
CRR073316Gold flowering 220.843
CRR073317Gold flowering 32.286
CRR073318Tawny withering 149.788
CRR073319Tawny withering 257.231
CRR073320Tawny withering 342.708