Detail information of GWHGAAZE012433


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP07972.10unnamed protein product [Coffea canephora]
Swissprottr|D2XNQ8|FLOT1_MEDTR0Flotillin-like protein 1
trEMBLtr|A0A068UI48|A0A068UI48_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_29 {ECO:0000313|EMBL:CDP07972.1}
TAIR10AT5G25250.10SPFH/Band 7/PHB domain-containing membrane-associated protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8532818385331776-
GWHAAZE00000003mRNA8532818385331776-
GWHAAZE00000003exon8533165785331776-
GWHAAZE00000003exon8532923185330168-
GWHAAZE00000003exon8532818385328695-
GWHAAZE00000003five_prime_UTR8533165785331776-
GWHAAZE00000003five_prime_UTR8533016185330168-
GWHAAZE00000003CDS8532923185330160-
GWHAAZE00000003CDS8532818385328695-
Transcript Sequence

Network for GWHGAAZE012433

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01145.26Band_771852.80E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07192FLOT Insulin signaling pathway map04910

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.932
SRR3591706second leaf4.304
SRR3591707mature leaf4.120
SRR3591708Shoot apex6.422
SRR3591709Stem1.898
SRR3591710White floral bud7.140
SRR3591711White flower9.143
SRR3591712Green floral bud11.830
SRR3591713Yellow flower4.573
SRP173429 SRR8316895Juvenile bud stage 9.674
SRR8316896Juvenile bud stage 14.462
SRR8316897Juvenile bud stage 5.467
SRR8316894Third green stage 4.822
SRR8316900Third green stage 11.967
SRR8316901Third green stage 11.415
SRR8316898Complete white stage 2.436
SRR8316899Complete white stage 7.927
SRR8316903Complete white stage 3.420
SRR8316902Silver flowering stage1.564
SRR8316904Silver flowering stage1.903
SRR8316905Silver flowering stage0.648
SRR8316906Gold flowering stage 3.896
SRR8316907Gold flowering stage 2.522
SRR8316908Gold flowering stage 3.460
SRP132670SRR6706286Control24.417
SRR6706287Light intensity 50%23.830
SRR6706288Light intensity 20%27.057
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.342
CNS0095593Slightly white alabastrum(diploid) 24.536
CNS0095594Slightly white alabastrum(diploid) 310.235
CNS0095595Whole white alabastrum(diploid) 25.942
CNS0095596Whole white alabastrum(diploid) 36.288
CNS0095597Whole white alabastrum(diploid) 46.268
CNS0095598Silvery flower (diploied) 13.510
CNS0095599Silvery flower (diploied) 22.159
CNS0095600Silvery flower (diploied) 33.737
CNS0095601Golden flower (diploid) 13.274
CNS0095602Golden flower (diploid) 24.627
CNS0095603Golden flower (diploid) 34.841
CNS0095604Slightly white alabastrum(tetraploid) 19.838
CNS0095605Slightly white alabastrum(tetraploid) 27.805
CNS0095606Slightly white alabastrum(tetraploid) 310.217
CNS0095607Whole white alabastrum(tetraploid) 14.122
CNS0095608Whole white alabastrum(tetraploid) 23.913
CNS0095609Whole white alabastrum(tetraploid) 315.316
CNS0095610Silvery flower (tetraploid) 16.942
CNS0095611Silvery flower (tetraploid) 28.673
CNS0095612Silvery flower (tetraploid) 37.117
CNS0095613Golden flower (tetraploid) 12.893
CNS0095614Golden flower (tetraploid) 25.060
CNS0095615Golden flower (tetraploid) 32.453
CRA001975CRR073297Stem 115.420
CRR073298Stem 214.321
CRR073299Stem 316.853
CRR073300Leaf 115.822
CRR073301Leaf 214.670
CRR073302Leaf 315.579
CRR073303Juvenile bud 113.801
CRR073304Juvenile bud 212.527
CRR073305Juvenile bud 315.420
CRR073306Third green 12.284
CRR073307Third green 21.053
CRR073308Third green 31.530
CRR073309Second white 11.191
CRR073310Second white 23.102
CRR073311Second white 31.983
CRR073312Silver flowering 12.646
CRR073313Silver flowering 21.788
CRR073314Silver flowering 32.305
CRR073315Gold flowering 11.381
CRR073316Gold flowering 21.591
CRR073317Gold flowering 30.893
CRR073318Tawny withering 10.185
CRR073319Tawny withering 20.242
CRR073320Tawny withering 30.427