Detail information of GWHGAAZE012490


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007225206.10hypothetical protein PRUPE_ppa002039mg [Prunus persica]
Swissprottr|Q9ZU97|VAC14_ARATH0Protein VAC14 homolog
trEMBLtr|M5Y3P4|M5Y3P4_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ26405.1}
TAIR10AT2G01690.10ARM repeat superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8645780486467416+
GWHAAZE00000003mRNA8645780486467416+
GWHAAZE00000003exon8645780486457893+
GWHAAZE00000003exon8645798486458097+
GWHAAZE00000003exon8645823986458304+
GWHAAZE00000003exon8646053386460622+
GWHAAZE00000003exon8646070186460820+
GWHAAZE00000003exon8646120786461235+
GWHAAZE00000003exon8646135386461495+
GWHAAZE00000003exon8646158286461676+
GWHAAZE00000003exon8646193786462023+
GWHAAZE00000003exon8646217586462282+
GWHAAZE00000003exon8646245586462565+
GWHAAZE00000003exon8646271086462820+
GWHAAZE00000003exon8646384886463913+
GWHAAZE00000003exon8646415886464273+
GWHAAZE00000003exon8646436086464480+
GWHAAZE00000003exon8646488286465049+
GWHAAZE00000003exon8646514786465275+
GWHAAZE00000003exon8646562886465696+
GWHAAZE00000003exon8646697486467416+
GWHAAZE00000003CDS8645780486457893+
GWHAAZE00000003CDS8645798486458097+
GWHAAZE00000003CDS8645823986458304+
GWHAAZE00000003CDS8646053386460622+
GWHAAZE00000003CDS8646070186460820+
GWHAAZE00000003CDS8646120786461235+
GWHAAZE00000003CDS8646135386461495+
GWHAAZE00000003CDS8646158286461676+
GWHAAZE00000003CDS8646193786462023+
GWHAAZE00000003CDS8646217586462282+
GWHAAZE00000003CDS8646245586462565+
GWHAAZE00000003CDS8646271086462820+
GWHAAZE00000003CDS8646384886463913+
GWHAAZE00000003CDS8646415886464273+
GWHAAZE00000003CDS8646436086464480+
GWHAAZE00000003CDS8646488286465049+
GWHAAZE00000003CDS8646514786465275+
GWHAAZE00000003CDS8646562886465696+
GWHAAZE00000003CDS8646697486467276+
GWHAAZE00000003three_prime_UTR8646727786467416+
Transcript Sequence

Network for GWHGAAZE012490

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12755.8Vac14_Fab1_bd651617.10E-41
PF11916.9Vac14_Fig4_bd4456263.30E-70
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE012490.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 30510152025303540455055Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf38.888
SRR3591706second leaf25.054
SRR3591707mature leaf31.556
SRR3591708Shoot apex35.067
SRR3591709Stem40.121
SRR3591710White floral bud50.841
SRR3591711White flower46.408
SRR3591712Green floral bud40.678
SRR3591713Yellow flower46.881
SRP173429 SRR8316895Juvenile bud stage 20.018
SRR8316896Juvenile bud stage 28.712
SRR8316897Juvenile bud stage 13.024
SRR8316894Third green stage 13.265
SRR8316900Third green stage 34.840
SRR8316901Third green stage 29.602
SRR8316898Complete white stage 17.240
SRR8316899Complete white stage 44.474
SRR8316903Complete white stage 27.232
SRR8316902Silver flowering stage12.510
SRR8316904Silver flowering stage20.173
SRR8316905Silver flowering stage9.652
SRR8316906Gold flowering stage 36.142
SRR8316907Gold flowering stage 34.595
SRR8316908Gold flowering stage 40.566
SRP132670SRR6706286Control24.611
SRR6706287Light intensity 50%26.591
SRR6706288Light intensity 20%29.331
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.968
CNS0095593Slightly white alabastrum(diploid) 218.572
CNS0095594Slightly white alabastrum(diploid) 322.323
CNS0095595Whole white alabastrum(diploid) 221.620
CNS0095596Whole white alabastrum(diploid) 319.194
CNS0095597Whole white alabastrum(diploid) 420.588
CNS0095598Silvery flower (diploied) 118.003
CNS0095599Silvery flower (diploied) 215.873
CNS0095600Silvery flower (diploied) 332.279
CNS0095601Golden flower (diploid) 117.516
CNS0095602Golden flower (diploid) 234.713
CNS0095603Golden flower (diploid) 331.922
CNS0095604Slightly white alabastrum(tetraploid) 125.315
CNS0095605Slightly white alabastrum(tetraploid) 224.271
CNS0095606Slightly white alabastrum(tetraploid) 336.147
CNS0095607Whole white alabastrum(tetraploid) 123.972
CNS0095608Whole white alabastrum(tetraploid) 223.843
CNS0095609Whole white alabastrum(tetraploid) 330.405
CNS0095610Silvery flower (tetraploid) 130.401
CNS0095611Silvery flower (tetraploid) 232.716
CNS0095612Silvery flower (tetraploid) 334.359
CNS0095613Golden flower (tetraploid) 122.689
CNS0095614Golden flower (tetraploid) 234.177
CNS0095615Golden flower (tetraploid) 344.271
CRA001975CRR073297Stem 134.601
CRR073298Stem 232.956
CRR073299Stem 329.886
CRR073300Leaf 139.433
CRR073301Leaf 233.646
CRR073302Leaf 327.997
CRR073303Juvenile bud 134.898
CRR073304Juvenile bud 226.560
CRR073305Juvenile bud 334.598
CRR073306Third green 125.062
CRR073307Third green 219.715
CRR073308Third green 323.685
CRR073309Second white 131.549
CRR073310Second white 231.003
CRR073311Second white 330.633
CRR073312Silver flowering 136.521
CRR073313Silver flowering 234.099
CRR073314Silver flowering 326.451
CRR073315Gold flowering 115.713
CRR073316Gold flowering 223.014
CRR073317Gold flowering 318.276
CRR073318Tawny withering 132.790
CRR073319Tawny withering 232.818
CRR073320Tawny withering 330.179