Detail information of GWHGAAZE012494


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011024017.17.12149E-98PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A-like [Populus euphratica]
Swissprottr|Q9CAB6|UEV1B_ARATH1E-87Ubiquitin-conjugating enzyme E2 variant 1B
trEMBLtr|A0A067KPG6|A0A067KPG6_JATCU1E-96Uncharacterized protein {ECO:0000313|EMBL:KDP38106.1}
TAIR10AT1G70650.28E-66Ran BP2/NZF zinc finger-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8652040286521640-
GWHAAZE00000003mRNA8652040286521640-
GWHAAZE00000003exon8652147086521640-
GWHAAZE00000003exon8652110686521231-
GWHAAZE00000003exon8652090186521027-
GWHAAZE00000003exon8652040286520460-
GWHAAZE00000003CDS8652147086521640-
GWHAAZE00000003CDS8652110686521231-
GWHAAZE00000003CDS8652090186521027-
GWHAAZE00000003CDS8652040286520460-
Transcript Sequence

Network for GWHGAAZE012494

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.27UQ_con421351.70E-16
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10704UBE2V Toll and Imd signaling pathway map04624

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf45.113
SRR3591706second leaf41.583
SRR3591707mature leaf67.648
SRR3591708Shoot apex83.766
SRR3591709Stem69.174
SRR3591710White floral bud49.421
SRR3591711White flower63.961
SRR3591712Green floral bud59.741
SRR3591713Yellow flower67.740
SRP173429 SRR8316895Juvenile bud stage 59.775
SRR8316896Juvenile bud stage 97.586
SRR8316897Juvenile bud stage 28.542
SRR8316894Third green stage 31.630
SRR8316900Third green stage 101.117
SRR8316901Third green stage 89.058
SRR8316898Complete white stage 33.686
SRR8316899Complete white stage 125.237
SRR8316903Complete white stage 56.588
SRR8316902Silver flowering stage39.231
SRR8316904Silver flowering stage36.547
SRR8316905Silver flowering stage21.172
SRR8316906Gold flowering stage 80.566
SRR8316907Gold flowering stage 83.225
SRR8316908Gold flowering stage 61.807
SRP132670SRR6706286Control55.643
SRR6706287Light intensity 50%66.061
SRR6706288Light intensity 20%71.932
CNP0000432CNS0095592Slightly white alabastrum(diploid) 190.862
CNS0095593Slightly white alabastrum(diploid) 282.440
CNS0095594Slightly white alabastrum(diploid) 376.845
CNS0095595Whole white alabastrum(diploid) 281.144
CNS0095596Whole white alabastrum(diploid) 386.355
CNS0095597Whole white alabastrum(diploid) 479.840
CNS0095598Silvery flower (diploied) 1106.742
CNS0095599Silvery flower (diploied) 299.473
CNS0095600Silvery flower (diploied) 395.827
CNS0095601Golden flower (diploid) 1119.405
CNS0095602Golden flower (diploid) 299.567
CNS0095603Golden flower (diploid) 3108.098
CNS0095604Slightly white alabastrum(tetraploid) 182.718
CNS0095605Slightly white alabastrum(tetraploid) 280.999
CNS0095606Slightly white alabastrum(tetraploid) 3116.963
CNS0095607Whole white alabastrum(tetraploid) 158.910
CNS0095608Whole white alabastrum(tetraploid) 248.057
CNS0095609Whole white alabastrum(tetraploid) 382.045
CNS0095610Silvery flower (tetraploid) 175.701
CNS0095611Silvery flower (tetraploid) 2101.244
CNS0095612Silvery flower (tetraploid) 360.764
CNS0095613Golden flower (tetraploid) 190.215
CNS0095614Golden flower (tetraploid) 288.454
CNS0095615Golden flower (tetraploid) 363.967
CRA001975CRR073297Stem 185.176
CRR073298Stem 281.846
CRR073299Stem 378.307
CRR073300Leaf 174.101
CRR073301Leaf 266.251
CRR073302Leaf 373.926
CRR073303Juvenile bud 168.017
CRR073304Juvenile bud 256.940
CRR073305Juvenile bud 355.400
CRR073306Third green 122.829
CRR073307Third green 226.858
CRR073308Third green 331.360
CRR073309Second white 133.644
CRR073310Second white 240.083
CRR073311Second white 319.225
CRR073312Silver flowering 120.070
CRR073313Silver flowering 216.541
CRR073314Silver flowering 312.548
CRR073315Gold flowering 164.890
CRR073316Gold flowering 267.147
CRR073317Gold flowering 363.395
CRR073318Tawny withering 150.782
CRR073319Tawny withering 275.142
CRR073320Tawny withering 350.917