Detail information of GWHGAAZE012520


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011075467.13.60939E-67PREDICTED: kirola-like [Sesamum indicum]
Swissprottr|P85524|KIRO_ACTDE4E-52Kirola {ECO:0000303|PubMed:21309790}
trEMBLtr|A0A022Q7H0|A0A022Q7H0_ERYGU1E-67Uncharacterized protein {ECO:0000313|EMBL:EYU23173.1}
TAIR10AT1G70840.14E-36MLP-like protein 31

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8701405387016034-
GWHAAZE00000003mRNA8701405387016034-
GWHAAZE00000003exon8701584887016034-
GWHAAZE00000003exon8701405387014318-
GWHAAZE00000003CDS8701584887016034-
GWHAAZE00000003CDS8701405387014318-
Transcript Sequence

Network for GWHGAAZE012520

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0075


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00407.20Bet_v_131494.10E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006952biological_processdefense response

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.324
SRR3591706second leaf41.576
SRR3591707mature leaf28.467
SRR3591708Shoot apex73.756
SRR3591709Stem4.580
SRR3591710White floral bud7.322
SRR3591711White flower6.817
SRR3591712Green floral bud7.328
SRR3591713Yellow flower2.318
SRP173429 SRR8316895Juvenile bud stage 13.151
SRR8316896Juvenile bud stage 8.262
SRR8316897Juvenile bud stage 1.607
SRR8316894Third green stage 6.646
SRR8316900Third green stage 10.419
SRR8316901Third green stage 11.172
SRR8316898Complete white stage 0.008
SRR8316899Complete white stage 8.079
SRR8316903Complete white stage 8.212
SRR8316902Silver flowering stage0.338
SRR8316904Silver flowering stage2.299
SRR8316905Silver flowering stage0.110
SRR8316906Gold flowering stage 0.339
SRR8316907Gold flowering stage 0.349
SRR8316908Gold flowering stage 0.141
SRP132670SRR6706286Control0.693
SRR6706287Light intensity 50%0.968
SRR6706288Light intensity 20%0.521
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.239
CNS0095593Slightly white alabastrum(diploid) 211.425
CNS0095594Slightly white alabastrum(diploid) 311.645
CNS0095595Whole white alabastrum(diploid) 27.379
CNS0095596Whole white alabastrum(diploid) 33.092
CNS0095597Whole white alabastrum(diploid) 48.154
CNS0095598Silvery flower (diploied) 1237.812
CNS0095599Silvery flower (diploied) 2224.002
CNS0095600Silvery flower (diploied) 331.082
CNS0095601Golden flower (diploid) 1198.828
CNS0095602Golden flower (diploid) 284.848
CNS0095603Golden flower (diploid) 378.669
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.204
CNS0095606Slightly white alabastrum(tetraploid) 30.739
CNS0095607Whole white alabastrum(tetraploid) 10.517
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.511
CNS0095611Silvery flower (tetraploid) 21.090
CNS0095612Silvery flower (tetraploid) 30.339
CNS0095613Golden flower (tetraploid) 10.422
CNS0095614Golden flower (tetraploid) 21.431
CNS0095615Golden flower (tetraploid) 30.783
CRA001975CRR073297Stem 11.321
CRR073298Stem 21.913
CRR073299Stem 33.302
CRR073300Leaf 10.435
CRR073301Leaf 20.293
CRR073302Leaf 30.098
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.060
CRR073305Juvenile bud 30.040
CRR073306Third green 10.022
CRR073307Third green 20.000
CRR073308Third green 30.045
CRR073309Second white 10.000
CRR073310Second white 20.207
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.236
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.139
CRR073316Gold flowering 20.299
CRR073317Gold flowering 30.255
CRR073318Tawny withering 10.589
CRR073319Tawny withering 21.453
CRR073320Tawny withering 30.264