Detail information of GWHGAAZE012594


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004249522.11.16843E-88PREDICTED: probable acetyltransferase NATA1-like [Solanum lycopersicum]
Swissprottr|Q9ZV06|NATAL_ARATH6E-73Probable acetyltransferase NATA1-like
trEMBLtr|K4D3P8|K4D3P8_SOLLC4E-89Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc10g084640.1.1}
TAIR10AT2G39020.17E-59Acyl-CoA N-acyltransferases (NAT) superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8821120588211852-
GWHAAZE00000003mRNA8821120588211852-
GWHAAZE00000003exon8821120588211852-
GWHAAZE00000003CDS8821120588211852-
Transcript Sequence

Network for GWHGAAZE012594

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00583.26Acetyltransf_11131908.90E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008080molecular_functionN-acetyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf44.786
SRR3591706second leaf30.136
SRR3591707mature leaf8.588
SRR3591708Shoot apex64.548
SRR3591709Stem23.718
SRR3591710White floral bud31.233
SRR3591711White flower26.779
SRR3591712Green floral bud42.810
SRR3591713Yellow flower17.538
SRP173429 SRR8316895Juvenile bud stage 19.461
SRR8316896Juvenile bud stage 26.358
SRR8316897Juvenile bud stage 10.039
SRR8316894Third green stage 9.457
SRR8316900Third green stage 32.200
SRR8316901Third green stage 26.143
SRR8316898Complete white stage 10.524
SRR8316899Complete white stage 29.056
SRR8316903Complete white stage 17.811
SRR8316902Silver flowering stage12.135
SRR8316904Silver flowering stage10.352
SRR8316905Silver flowering stage3.169
SRR8316906Gold flowering stage 7.744
SRR8316907Gold flowering stage 5.758
SRR8316908Gold flowering stage 6.721
SRP132670SRR6706286Control48.044
SRR6706287Light intensity 50%43.400
SRR6706288Light intensity 20%47.835
CNP0000432CNS0095592Slightly white alabastrum(diploid) 136.682
CNS0095593Slightly white alabastrum(diploid) 229.245
CNS0095594Slightly white alabastrum(diploid) 331.156
CNS0095595Whole white alabastrum(diploid) 223.521
CNS0095596Whole white alabastrum(diploid) 323.429
CNS0095597Whole white alabastrum(diploid) 419.039
CNS0095598Silvery flower (diploied) 114.405
CNS0095599Silvery flower (diploied) 215.026
CNS0095600Silvery flower (diploied) 319.666
CNS0095601Golden flower (diploid) 110.150
CNS0095602Golden flower (diploid) 218.124
CNS0095603Golden flower (diploid) 317.418
CNS0095604Slightly white alabastrum(tetraploid) 127.264
CNS0095605Slightly white alabastrum(tetraploid) 223.404
CNS0095606Slightly white alabastrum(tetraploid) 344.292
CNS0095607Whole white alabastrum(tetraploid) 115.253
CNS0095608Whole white alabastrum(tetraploid) 210.959
CNS0095609Whole white alabastrum(tetraploid) 326.355
CNS0095610Silvery flower (tetraploid) 112.259
CNS0095611Silvery flower (tetraploid) 212.063
CNS0095612Silvery flower (tetraploid) 37.999
CNS0095613Golden flower (tetraploid) 14.334
CNS0095614Golden flower (tetraploid) 210.335
CNS0095615Golden flower (tetraploid) 33.666
CRA001975CRR073297Stem 129.008
CRR073298Stem 228.533
CRR073299Stem 335.677
CRR073300Leaf 118.615
CRR073301Leaf 224.203
CRR073302Leaf 323.888
CRR073303Juvenile bud 118.334
CRR073304Juvenile bud 220.830
CRR073305Juvenile bud 335.171
CRR073306Third green 13.867
CRR073307Third green 27.991
CRR073308Third green 39.982
CRR073309Second white 15.660
CRR073310Second white 22.071
CRR073311Second white 32.427
CRR073312Silver flowering 12.193
CRR073313Silver flowering 22.825
CRR073314Silver flowering 34.057
CRR073315Gold flowering 18.473
CRR073316Gold flowering 28.739
CRR073317Gold flowering 311.473
CRR073318Tawny withering 133.753
CRR073319Tawny withering 219.462
CRR073320Tawny withering 334.643