Gene detail

Detail information of GWHGAAZE012637

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_010662132.1	PREDICTED: serine/threonine-protein kinase TIO [Vitis vinifera]
Swissprot	tr\|Q2QAV0\|TIO_ARATH	Serine/threonine-protein kinase TIO
trEMBL	tr\|F6HEG7\|F6HEG7_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB50613.1}
TAIR10	AT1G50240.2	Protein kinase family protein with ARM repeat domain

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	88903023	88915168	+
GWHAAZE00000003	mRNA	88903023	88915168	+
GWHAAZE00000003	exon	88903023	88903112	+
GWHAAZE00000003	exon	88903214	88903288	+
GWHAAZE00000003	exon	88903784	88903876	+
GWHAAZE00000003	exon	88904039	88904113	+
GWHAAZE00000003	exon	88904240	88904332	+
GWHAAZE00000003	exon	88904825	88904861	+
GWHAAZE00000003	exon	88905387	88905471	+
GWHAAZE00000003	exon	88905999	88906071	+
GWHAAZE00000003	exon	88906155	88906223	+
GWHAAZE00000003	exon	88906329	88906454	+
GWHAAZE00000003	exon	88906782	88906884	+
GWHAAZE00000003	exon	88906959	88907108	+
GWHAAZE00000003	exon	88908025	88908163	+
GWHAAZE00000003	exon	88908929	88909100	+
GWHAAZE00000003	exon	88910073	88910171	+
GWHAAZE00000003	exon	88910257	88910772	+
GWHAAZE00000003	exon	88911253	88912413	+
GWHAAZE00000003	exon	88913019	88913252	+
GWHAAZE00000003	exon	88913385	88913528	+
GWHAAZE00000003	exon	88913717	88913797	+
GWHAAZE00000003	exon	88914098	88914286	+
GWHAAZE00000003	exon	88914923	88915168	+
GWHAAZE00000003	CDS	88903023	88903112	+
GWHAAZE00000003	CDS	88903214	88903288	+
GWHAAZE00000003	CDS	88903784	88903876	+
GWHAAZE00000003	CDS	88904039	88904113	+
GWHAAZE00000003	CDS	88904240	88904332	+
GWHAAZE00000003	CDS	88904825	88904861	+
GWHAAZE00000003	CDS	88905387	88905471	+
GWHAAZE00000003	CDS	88905999	88906071	+
GWHAAZE00000003	CDS	88906155	88906223	+
GWHAAZE00000003	CDS	88906329	88906454	+
GWHAAZE00000003	CDS	88906782	88906884	+
GWHAAZE00000003	CDS	88906959	88907108	+
GWHAAZE00000003	CDS	88908025	88908163	+
GWHAAZE00000003	CDS	88908929	88909100	+
GWHAAZE00000003	CDS	88910073	88910171	+
GWHAAZE00000003	CDS	88910257	88910772	+
GWHAAZE00000003	CDS	88911253	88912413	+
GWHAAZE00000003	CDS	88913019	88913252	+
GWHAAZE00000003	CDS	88913385	88913528	+
GWHAAZE00000003	CDS	88913717	88913797	+
GWHAAZE00000003	CDS	88914098	88914286	+
GWHAAZE00000003	CDS	88914923	88915168	+

Transcript Sequence
>GWHTAAZE012651 ATGGGTGTTGAAAACTACCATGTAATAGAGCTGGTTGGGGAAGGCTCTTTTGGGAAGGTATACAAGGGAAGGAGGAAGTACACAGGCCAGACTGTTGCAATGAAATTTATACTTAAGCATGGTAAAAGCGAGAAGGACATTCAGAATTTAAGACAGGAGATCGAGATCCTAAGAAAGTTGAAGCATGAAAATATAATTGGAATGCTGGACTCTTTTGAAAGCCCACAAGAGTTTTGTGTTGTCACAGAATTTGCCCAAGGTGAACTATTTGAGATTCTTGAAGACGACAAGTGCCTTCCGGAGGAAGAAGTTCAAGCAATTGCTAAGCAGTTGGTGAGAGCATTGTATTACTTACATTCCAACCGTATAATCCATCGTGATATGAAGCCACAAAATATCCTTATTGGTGCTGGGTCTGTTGTTAAGTTGGTTCTTGTACCTGAAGAAGAACAAGAAATTATATGTACTCCTTTATACATGGCTCCAGAATTGGTGAGGGAACAACCATACAACCACACCGCCGATTTGTGGTCCCTTGGCGTAATTTTGTATGAACTTTTTGTTGGTCAACCTCCATTCTACACAAACTCAGTATATGCTCTCATTCGGCACATCATTAAGGATCCTGTTAAATATCCGGAGAGCATGAGCTCAAATTTCAAAAGCTTCCTTAGGGGTTTGCTGAATAAGGTTCCACAAAACAGATTGACCTGGCCTGCTCTTCTTGAACATCCATTTGTGAAAGAAACTATGGAGGATTTGGAAGCCAGGGTAAAAATTTATTCTTATGCATCTGCAGCATTTCCAGCATTTAGGGAGAATCGTGCAGCCACTGCTGCTGCAAGAGGCTGTGATGCAGCTTGGAAAGGGGAAGGATATAATCCATTGACAAAAGGATTGACTATTGCAAGTCCTGAGAGTAAAAGCCATTCTCCTGCTGCTACAGAAATTGTTTGTGTACCAAGCCTTCAGACCGATTCACATTCAAATAGTCCTAACTCAGCCATAGGCAATTCTTCGCCACAGGACTTCCCTGGAGTTACTAGTCCTGGTGATATTATTCAGTCAGGTTGCCAGGTGTTGGATAGGTTGGAAAACAACTCCCGCACGGTTAAGGGAGCTAAAATTATTGGTCAAGATAATGAAGCACTATCATTTATTTTGCTACCACTGAAAAAATGGGGTAAAGGATCTAATGATTCTTGCAGGGATCAGGATATTCTTAGTTCAAATCAGTCACTCAGAATTCTTTCAAACTTAGTTGCTGCTAGTGCTATCAGTTTTACTGCAGTACTTGAGGAAATAACACATGAACTTCTTGGTTTCACTGCTAGTGTGGTTACGTTGAAACTCTCTGGTGGTGATGATTTAGTGGCAAAGAGCTTCTCAATTATAAAAAAGCTAGTAGATAGCAGCGGAGTTGGTATTGGGGGCTTGTATTTCACGCACTGGGTTACACTAGTGGAATTGTATTCTCAGGTTGTTGGTTCAACAGACGATGCATCTGGCAGAGTTTTATACGAGTCCACTGCTTGCATCACAGTCATGCTATCTCGAGTAGCACAGGGTCTCAAAGCATCTGCCGTTTCAGTTCCTGAGGTGAATGAAACTCTCAAACAAATTATGGACCATGCTAAAACGTCGGGTGTAACGGATCTTTTGTGTTTGTGCTTAGCTACTTCTGGCTCAAGCCTCATATCTGGTTCTTCAAATTTGTTGCGTGCTGCTTGTGAAGCATGCAGGGCAGTTTGGTCATTAATAGATGCATTTGAAATTCTTACTCATAAGGAAAATGCCTATTTATTTCCATTATTTGCTTTGCGGAGCCATTCTTTGCTCCGGCTTGACATTAGAGGCCAAGACCGAGGCTCATGGGTTGGGACAGATTCAACAAAAGCTGTTGATGTAGTGACGAGAGCATTCCTCAAATCCAAAGCCATTCAAGTGGCTATTTACTACTGTCTTCATCAACGTCTCGAGGCTACCTGTGTGCTGCTCATCTTAAGGTGCTGCCTGCATAGTGGCACTGTGTCGAGTATTCTCTGTGGCCTACCTAGTTCTCTACCTGTTACAACAGTTGTTAGTGGGGGAGGTGATGGTACAATTATTTCCGAGATCTTCTCTGTACTGTCCTTTTGCGCTTCATTAAACAGGGATCCACAAGCAGGAGATCAAAGTAACCTAAAAGGCAAAATATCGAATCCATCCATTCTAGTTCTACATTCAAGCCTTATCATTGCCACAGTTGCACAATGTTTTAAGTCAGCCGGAAGGAACTCTGCATTGTTTATGCTTTCATCATCTTCGAAAAAGCAGCTTTCTCGTCTCTCTGTCCTTGCACACCATTTTTCATCTGATGATAGAATGCAAAAATCCCTTCAACCACATTGTTCGTCTGCTATGCTAGCTCTCGCATCCATTTTGTCCCTTGAAACTGGTGGTTTGGTCGAATCTTCCATTTCTGAAATAGCTGTGCCTTTAATTCCCCGAACTGCTACACTTTGTGACCACCTTAGGGTTCTTGCAATAGATGAAACTGGGGCTCCACCAGTGACAGTACCAAATAGCCTGCTCTCGTACTGGCATGGCCCTAGGGACGGGTGTGTTGGTTTGTTGGATTCTAGACTGAAATGGGGAGGACCGTTGGCCGTTCAACAGTTGTGTGCCAGTGGGATCCCCCAGCTTCTTGTTGCTCTGCTGGCTAACAGCCTTCCAGATTCTTCTTCACAAGGAACTGAAAGTACAAAAGATAAAATTGGGCTATCACCTATTGGGGTAGTGTGGACCATTTCTTCTATATGCCAATGCCTTTCTGGTGGATTTGTAACATTTCGGCAGATTTTACTAAGGAGTGAAAACGTTAAGTTCGTTTCTGATTTGATATCCGATGTACATCTTAAGCTTGTAAGGTGCTGGGGTGGGACTGATGGAGGAAAAGATGGGGTCAGAGATACTGTAAATGCGGTGATTGATCTCTTAGCATTTCCTTTTGTGGCGGTACAAAGTGGCCCGGGGTTGCCATCTGCCACTGCTTCAGTAAACAGTGGGTTTCTCCTAAACATGGGCTCACCTGGTGGGAGGGTATGTGCTGAAGACAAGGATATGGTAAAAGCAATAGAGACGAGCATGGGAAAGTACATTCAAATTCTTGTGGAGGTGGGAGTGCCTGGAGCTATTCTTCGGTGCTTGGAACATGTGGAGTCAAAAGATTTTGCAAGACCAGTTGCATTTCTTGCAAAAATGACAGGCCACCGAGCACTGGTGGTTCAACTTCTAGGCAAAGGACTGTTGGATCCAGCCAGAATGAGAAGGTTGCTTGATGGTTCATGCCCAAGGGAAGTCACACTGGATGTTTTAATGATAGTTTCTGATCTAGCTCGTATGGATAAGATGTTTTACGAATGCATCAATGGGGCGGATATATTGGAGTTCTTGAAGGGTTTTCTTACCCATGAAGATCCCAATGTGCGTGCAAAGACGTGCAGTGCCATAGGCAACATGTGCCGGCATAGCTCCTACTTCTATAGTTTATTGGCACAGCATCATACCATTAGCCTTCTTATTGATCGGTGTGCTGATCCTGATAAACGCACGCGGAAGTTTGCTTGTTTTGCAATTGGTAATGCTTCCTATCACAATGACTTGTTGTACGAAGAGCTAAGGAGGTCTATTCCTCAACTTGCAAATTTGCTGCTTTCAGCAGAGGAAGACAAAACCAAAGCAAATGCAGCAGGTGCTCTCAGTAACCTTGTCCGTAACTCCAACAAACTTTGTGAAGATATTGTTTCTAAAGGAGCCATGCAGGCCTTATTGAAGCTAGTGGCAGATTGTTCATTGGTAGCTCTGAACCCTAGTAAGAGAGATGCAATAAACGAGTCTCCACTAAAGATAGCTCTTTTCTCATTGGCAAAAATGTGCGCCCATCAGCCATGTAGGCAATTCCTCCGGTCATCGGATCTCTTCCCGGTGATTGGCCGCCTCCGGCAATCACCGGAGTCGACAATTGCTAATTACGCTTCTGTCATTATCAGCAAAACTTCTGAAGGTTGA

Network for GWHGAAZE012637

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	6	247	3.40E-67

Protein Sequence

>GWHPAAZE012644
MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFILKHGKSEKDIQNLRQEIEILRKLKHENIIGMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEEVQAIAKQLVRALYYLHSNRIIHRDMKPQNILIGAGSVVKLVLVPEEEQEIICTPLYMAPELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIIKDPVKYPESMSSNFKSFLRGLLNKVPQNRLTWPALLEHPFVKETMEDLEARVKIYSYASAAFPAFRENRAATAAARGCDAAWKGEGYNPLTKGLTIASPESKSHSPAATEIVCVPSLQTDSHSNSPNSAIGNSSPQDFPGVTSPGDIIQSGCQVLDRLENNSRTVKGAKIIGQDNEALSFILLPLKKWGKGSNDSCRDQDILSSNQSLRILSNLVAASAISFTAVLEEITHELLGFTASVVTLKLSGGDDLVAKSFSIIKKLVDSSGVGIGGLYFTHWVTLVELYSQVVGSTDDASGRVLYESTACITVMLSRVAQGLKASAVSVPEVNETLKQIMDHAKTSGVTDLLCLCLATSGSSLISGSSNLLRAACEACRAVWSLIDAFEILTHKENAYLFPLFALRSHSLLRLDIRGQDRGSWVGTDSTKAVDVVTRAFLKSKAIQVAIYYCLHQRLEATCVLLILRCCLHSGTVSSILCGLPSSLPVTTVVSGGGDGTIISEIFSVLSFCASLNRDPQAGDQSNLKGKISNPSILVLHSSLIIATVAQCFKSAGRNSALFMLSSSSKKQLSRLSVLAHHFSSDDRMQKSLQPHCSSAMLALASILSLETGGLVESSISEIAVPLIPRTATLCDHLRVLAIDETGAPPVTVPNSLLSYWHGPRDGCVGLLDSRLKWGGPLAVQQLCASGIPQLLVALLANSLPDSSSQGTESTKDKIGLSPIGVVWTISSICQCLSGGFVTFRQILLRSENVKFVSDLISDVHLKLVRCWGGTDGGKDGVRDTVNAVIDLLAFPFVAVQSGPGLPSATASVNSGFLLNMGSPGGRVCAEDKDMVKAIETSMGKYIQILVEVGVPGAILRCLEHVESKDFARPVAFLAKMTGHRALVVQLLGKGLLDPARMRRLLDGSCPREVTLDVLMIVSDLARMDKMFYECINGADILEFLKGFLTHEDPNVRAKTCSAIGNMCRHSSYFYSLLAQHHTISLLIDRCADPDKRTRKFACFAIGNASYHNDLLYEELRRSIPQLANLLLSAEEDKTKANAAGALSNLVRNSNKLCEDIVSKGAMQALLKLVADCSLVALNPSKRDAINESPLKIALFSLAKMCAHQPCRQFLRSSDLFPVIGRLRQSPESTIANYASVIISKTSEG

Gene family

Gene family	subfamily
Protein Kinases Family	ULK_Fused

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0005524	molecular_function	ATP binding
GO:0004672	molecular_function	protein kinase activity
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	11.306
	SRR3591706	second leaf	1.160
	SRR3591707	mature leaf	0.282
	SRR3591708	Shoot apex	17.477
	SRR3591709	Stem	3.568
	SRR3591710	White floral bud	0.458
	SRR3591711	White flower	0.227
	SRR3591712	Green floral bud	0.778
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	3.487
	SRR8316896	Juvenile bud stage	5.060
	SRR8316897	Juvenile bud stage	1.876
	SRR8316894	Third green stage	1.879
	SRR8316900	Third green stage	3.905
	SRR8316901	Third green stage	3.380
	SRR8316898	Complete white stage	0.439
	SRR8316899	Complete white stage	2.711
	SRR8316903	Complete white stage	0.579
	SRR8316902	Silver flowering stage	0.158
	SRR8316904	Silver flowering stage	0.123
	SRR8316905	Silver flowering stage	0.103
	SRR8316906	Gold flowering stage	0.043
	SRR8316907	Gold flowering stage	0.161
	SRR8316908	Gold flowering stage	0.189
SRP132670	SRR6706286	Control	2.443
	SRR6706287	Light intensity 50%	2.471
	SRR6706288	Light intensity 20%	3.073
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.341
	CNS0095593	Slightly white alabastrum(diploid) 2	2.285
	CNS0095594	Slightly white alabastrum(diploid) 3	2.224
	CNS0095595	Whole white alabastrum(diploid) 2	1.352
	CNS0095596	Whole white alabastrum(diploid) 3	1.447
	CNS0095597	Whole white alabastrum(diploid) 4	1.291
	CNS0095598	Silvery flower (diploied) 1	2.154
	CNS0095599	Silvery flower (diploied) 2	3.425
	CNS0095600	Silvery flower (diploied) 3	1.458
	CNS0095601	Golden flower (diploid) 1	1.181
	CNS0095602	Golden flower (diploid) 2	1.205
	CNS0095603	Golden flower (diploid) 3	1.032
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.579
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.793
	CNS0095606	Slightly white alabastrum(tetraploid) 3	4.212
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.986
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.648
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.225
	CNS0095610	Silvery flower (tetraploid) 1	0.167
	CNS0095611	Silvery flower (tetraploid) 2	0.297
	CNS0095612	Silvery flower (tetraploid) 3	0.185
	CNS0095613	Golden flower (tetraploid) 1	0.076
	CNS0095614	Golden flower (tetraploid) 2	0.089
	CNS0095615	Golden flower (tetraploid) 3	0.036
CRA001975	CRR073297	Stem 1	7.178
	CRR073298	Stem 2	5.937
	CRR073299	Stem 3	6.675
	CRR073300	Leaf 1	3.850
	CRR073301	Leaf 2	4.284
	CRR073302	Leaf 3	3.876
	CRR073303	Juvenile bud 1	2.826
	CRR073304	Juvenile bud 2	1.467
	CRR073305	Juvenile bud 3	3.637
	CRR073306	Third green 1	0.103
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.308
	CRR073309	Second white 1	0.118
	CRR073310	Second white 2	0.054
	CRR073311	Second white 3	0.166
	CRR073312	Silver flowering 1	0.089
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.062
	CRR073315	Gold flowering 1	1.727
	CRR073316	Gold flowering 2	2.004
	CRR073317	Gold flowering 3	1.568
	CRR073318	Tawny withering 1	9.925
	CRR073319	Tawny withering 2	6.478
	CRR073320	Tawny withering 3	6.876