Detail information of GWHGAAZE012640


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006347560.10PREDICTED: uncharacterized protein At1g51745-like isoform X1 [Solanum tuberosum]
Swissprottr|P59278|Y1745_ARATH8E-57Uncharacterized protein At1g51745
trEMBLtr|M0ZII2|M0ZII2_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400001465}
TAIR10AT3G03140.19E-51Tudor/PWWP/MBT superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8895449288959346-
GWHAAZE00000003mRNA8895449288959346-
GWHAAZE00000003exon8895449288955149-
GWHAAZE00000003exon8895528188955476-
GWHAAZE00000003exon8895615588957173-
GWHAAZE00000003exon8895884988958995-
GWHAAZE00000003exon8895928888959346-
GWHAAZE00000003CDS8895928888959346-
GWHAAZE00000003CDS8895884988958995-
GWHAAZE00000003CDS8895615588957173-
GWHAAZE00000003CDS8895528188955476-
GWHAAZE00000003CDS8895449288955149-
Transcript Sequence

Network for GWHGAAZE012640

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0215


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00855.18PWWP21999.60E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.429
SRR3591706second leaf5.375
SRR3591707mature leaf10.637
SRR3591708Shoot apex7.866
SRR3591709Stem7.598
SRR3591710White floral bud10.120
SRR3591711White flower12.068
SRR3591712Green floral bud9.447
SRR3591713Yellow flower11.297
SRP173429 SRR8316895Juvenile bud stage 6.385
SRR8316896Juvenile bud stage 8.927
SRR8316897Juvenile bud stage 3.067
SRR8316894Third green stage 3.787
SRR8316900Third green stage 9.481
SRR8316901Third green stage 9.455
SRR8316898Complete white stage 5.262
SRR8316899Complete white stage 18.290
SRR8316903Complete white stage 8.954
SRR8316902Silver flowering stage5.033
SRR8316904Silver flowering stage6.399
SRR8316905Silver flowering stage3.778
SRR8316906Gold flowering stage 16.150
SRR8316907Gold flowering stage 12.817
SRR8316908Gold flowering stage 14.590
SRP132670SRR6706286Control9.388
SRR6706287Light intensity 50%9.893
SRR6706288Light intensity 20%8.863
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.415
CNS0095593Slightly white alabastrum(diploid) 25.458
CNS0095594Slightly white alabastrum(diploid) 35.861
CNS0095595Whole white alabastrum(diploid) 24.791
CNS0095596Whole white alabastrum(diploid) 34.938
CNS0095597Whole white alabastrum(diploid) 44.868
CNS0095598Silvery flower (diploied) 19.137
CNS0095599Silvery flower (diploied) 26.008
CNS0095600Silvery flower (diploied) 315.620
CNS0095601Golden flower (diploid) 18.849
CNS0095602Golden flower (diploid) 216.804
CNS0095603Golden flower (diploid) 316.100
CNS0095604Slightly white alabastrum(tetraploid) 18.577
CNS0095605Slightly white alabastrum(tetraploid) 25.509
CNS0095606Slightly white alabastrum(tetraploid) 314.166
CNS0095607Whole white alabastrum(tetraploid) 16.118
CNS0095608Whole white alabastrum(tetraploid) 25.256
CNS0095609Whole white alabastrum(tetraploid) 39.382
CNS0095610Silvery flower (tetraploid) 116.535
CNS0095611Silvery flower (tetraploid) 215.526
CNS0095612Silvery flower (tetraploid) 312.236
CNS0095613Golden flower (tetraploid) 19.396
CNS0095614Golden flower (tetraploid) 214.863
CNS0095615Golden flower (tetraploid) 317.212
CRA001975CRR073297Stem 115.491
CRR073298Stem 215.714
CRR073299Stem 314.141
CRR073300Leaf 114.739
CRR073301Leaf 214.587
CRR073302Leaf 312.472
CRR073303Juvenile bud 114.305
CRR073304Juvenile bud 29.948
CRR073305Juvenile bud 312.991
CRR073306Third green 18.885
CRR073307Third green 25.445
CRR073308Third green 37.793
CRR073309Second white 16.146
CRR073310Second white 210.049
CRR073311Second white 39.477
CRR073312Silver flowering 17.271
CRR073313Silver flowering 27.127
CRR073314Silver flowering 36.618
CRR073315Gold flowering 110.663
CRR073316Gold flowering 214.442
CRR073317Gold flowering 37.323
CRR073318Tawny withering 111.712
CRR073319Tawny withering 210.764
CRR073320Tawny withering 311.269