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Detail information of GWHGAAZE012677
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_010253494.1
0
PREDICTED: uncharacterized protein LOC104594717 isoform X1 [Nelumbo nucifera]
trEMBL
tr|W1NVR0|W1NVR0_AMBTC
0
Uncharacterized protein {ECO:0000313|EMBL:ERM99682.1}
TAIR10
AT3G49400.1
2E-112
Transducin/WD40 repeat-like superfamily protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000003
gene
89650022
89671715
+
GWHAAZE00000003
mRNA
89650022
89671715
+
GWHAAZE00000003
exon
89650022
89650138
+
GWHAAZE00000003
exon
89651931
89652015
+
GWHAAZE00000003
exon
89652845
89652947
+
GWHAAZE00000003
exon
89653051
89653135
+
GWHAAZE00000003
exon
89653603
89653689
+
GWHAAZE00000003
exon
89653820
89653926
+
GWHAAZE00000003
exon
89654190
89654325
+
GWHAAZE00000003
exon
89654416
89654518
+
GWHAAZE00000003
exon
89654971
89655190
+
GWHAAZE00000003
exon
89655918
89655976
+
GWHAAZE00000003
exon
89656736
89656860
+
GWHAAZE00000003
exon
89657444
89657904
+
GWHAAZE00000003
exon
89659773
89659854
+
GWHAAZE00000003
exon
89666650
89666826
+
GWHAAZE00000003
exon
89666908
89666983
+
GWHAAZE00000003
exon
89667113
89667177
+
GWHAAZE00000003
exon
89667262
89667354
+
GWHAAZE00000003
exon
89667443
89667496
+
GWHAAZE00000003
exon
89668526
89668572
+
GWHAAZE00000003
exon
89669685
89670359
+
GWHAAZE00000003
exon
89670972
89671134
+
GWHAAZE00000003
exon
89671596
89671715
+
GWHAAZE00000003
CDS
89650022
89650138
+
GWHAAZE00000003
CDS
89651931
89652015
+
GWHAAZE00000003
CDS
89652845
89652947
+
GWHAAZE00000003
CDS
89653051
89653135
+
GWHAAZE00000003
CDS
89653603
89653689
+
GWHAAZE00000003
CDS
89653820
89653926
+
GWHAAZE00000003
CDS
89654190
89654325
+
GWHAAZE00000003
CDS
89654416
89654518
+
GWHAAZE00000003
CDS
89654971
89655190
+
GWHAAZE00000003
CDS
89655918
89655976
+
GWHAAZE00000003
CDS
89656736
89656860
+
GWHAAZE00000003
CDS
89657444
89657904
+
GWHAAZE00000003
CDS
89659773
89659854
+
GWHAAZE00000003
CDS
89666650
89666826
+
GWHAAZE00000003
CDS
89666908
89666983
+
GWHAAZE00000003
CDS
89667113
89667177
+
GWHAAZE00000003
CDS
89667262
89667354
+
GWHAAZE00000003
CDS
89667443
89667496
+
GWHAAZE00000003
CDS
89668526
89668572
+
GWHAAZE00000003
CDS
89669685
89670359
+
GWHAAZE00000003
CDS
89670972
89671134
+
GWHAAZE00000003
CDS
89671596
89671715
+
Transcript Sequence
>GWHTAAZE012691 ATGGCGTCTCGTTTTCAGGCCGCTGCGCTAGTGGCTTCGCCGTCTTACCCTAATGCCGTCGCTTGGTCCGACGAGAACTTGCTCGCCGTTGCCTCCGGTCACCTCGTCACTATCCTGAATCCAGCTATGCCTTTTGGACCCCGTGGGTTGATTACAATCTCTGCCAGCAAACCTTTCTCAATCGGATTGATAGAAAGTAAAGATTTGCTCAGTGGTAGCTTGTTACCCATTTGTTTAACTCATGATGTTCGTCCTGGTGTTCGGTCAATTTCCTGGTCCCCCATTGGATTATCTCCCAACTCAGGATGTTTGCTTGCTGTTTGCACCACTGAAGGACGAGTTATGCTTTATCGTTTACCATACTGCGAGTTTTCTGCAGAGTGGGTAGAGGTGATGGATATATCTGAGATGCTGTACGCTTATCTTGCAAATATCAATTATGGGGAATTAAATTTTCCTTCATTAGAATATTCTGATGGGCAGGCAAGTAAGCTTGACTCAGAACATGGATCTGATGATGATCTACCAATAGCTGTTTTTCGAAAGAAACATAAGCGAAGAAGAAAAAATGCACTTGCCGTCATCAATAAGGAGTCTGGAACTTTACGAGATCCACCTTTTTGCTCTAGAAACAGTGAGGATGTTGAAAACTCATCGACTCTCTGTACAGAAGTTGCAGTTTTTCCTTGCTCACTTTTGCAGGAAGGTTCATCAATAGAGGTTCTTATAGTGGATGGAAACCAACGTGTTTGGGTTGCCGGCAAACTGCATCAACTGGATGGATCAAAAGCTCTTGTAAATTTCCCAGAAACTGATGGACATGGGAAACAAGATAAATGGGTTGAAATAAATCCCTTTCACAGCAACAGTGATGGATCAAATATCCACAACGAAATCATGGCTGGTCAAGATAATTGTTTTCCTGTGATTCGTCCTTCCATGGATGTGGGCAATTTTCCAGAACAGATATTGTCAGCTAGTTTTCATGGAGCGGATGATATTCTTAAAATTGGACAAACAGTGGAAACCTGGATAAATCACAGGTGGGTTGAAGGTGTGCTAATGGGTTTAAAGGGAAGCTCTCTGGAGGTGAAGCTTAATGGGGATACTGAATTGGTCATGATAGACACTCGCTATGTCAGGTTGGCACCAAGGTGGATTAATGAGAAAAAATCATGGCAAGTGACTGTTGTCAAAAGAGAAATTAAAGCCCAGGATTTGCGTAAGGCGGCCAGTGTCAAATCGAACAATCCGATAGAAAATAATCAGCTTCAAATCGTTTCTATGCCCAACTCTAAATCAAAAAAAAGGAGGCAAACAAGACAAAACTACAATAGCCCATATATAGCTGCAGATAAATATGCTTCTCGTAGTGCAATGCTATCATCACTTATTGTTGCATGGTCACCTATTCTAGAGATAACGTCCGATTTTCAGCTAATTTCTCAAAAAAACTTACTCAACTGTTGCTCCATACTAGCAGTTGGAGCAAAGTCTGGTCAAATTTCGTTTTGGAGAATTTATCCACAATGCTACTCTATTGTGCAAAGCGGGGACCCAACTTTTGGGGTGCTCATTGGACTTCAACAGGCACATAATTCTTGGATCACTGCAATCAATTGGGCGTTTTCAGTTTCTGATCCTTCGAATCCTCAACTTCTATTGGCTACAGGAAGTTCTGATGGGAGTGTGAAGATCTGGCAAGGGTATATTGCGGAATTGCTGAATTCATCAGAAGATAATCATGCTTCTTTTTCCCTACTGAAGGAGGTTATAAGTGTTGATTCGGTCCCAATCTCCGTACTTTCACTTATTGTGCCTGCACAATCTCCAGGCCAATTGCTCTTAGCAGTTGGTAAAGGTTCTGGATCTTTGGAAGTATGGATTTGTGACTTATCTGCCCACAAGTTTGATAAAGCTGGCTCTTATGATGCACATGACCATATTGTTACAGGTTTATCTTGGGCTTTAATGGAAATTGTTTGTATACGAATAATGGTGATTTTTGTGTATCAGGTTACAGTTCATATTTTCTATCATCTGCACCCTTATGATGCTCACAGCTTGAACGATATGCTATATGGCCTGGACGACTCCGTGCATAGCTGGATTTTACAAGGGAGTACTTTATGTCAAGTACCAATGCCTTCAAATACACCCGGAGTAAAGAGCTCCGCTGATGTTCCAAATGTATTTGATTCATGCTATGGTCTAGCAGTGTCCCCTGGAAATCTGGCTCGTAGGTTTGATGCATTTCTATTAAATCCAATGTACCAGGCGAGGGCTCGGAAGGCTGCTGTTGAGTTCTTCTGGATTGGAGGGCAGAAAATTGACATTTTATCCAACAGAAATCCAGATTTTGACATGGAGGTTCTTTTTGGTTTTGATCATAATGAATTGGTTTATTGGGAGCATAACATATTATGGTCTTTAAATTATTTTGAAAATCCGAATAGACCTTTGGTTATTTGGGATATTATAGCAGCACTATTGGCATTCAATGATTCTGCACCCAAATATGTAAACCACATACTATCCAAGTGGCTAATTTCATGTGTGGGACCCAAGTTGGGCCATTCTCCTGCAAAAATGACAAATTTAACCTCTCGCCAGTTGCAACTCCTCAATGTTATCAGTAGGCGTGTAGTACTTGAAGAGGGGAAGGAAGAAAAAGTTAACAGCAAAAAATTAGGAGAATGTGCATTTGAAGAGGAAGAACAAACTTTGTGGAGGGAGATACTTGAGAGCAGTGAAAAAGAACTCCGAGAAAGGCTTGTTAGTTTTAATTTTGGTGCCGTTATTGATCTTATTTCTCGTTTATCTACAAATTTTAGCAAATCTAGCTACTGGGTTCCTGTTGGATTAGCACAGATGGAGCAATGGGTTGCAAAAAATCACGGTCATGTTAGGGATCACCTAAAACACCTTGCATCCAAAGTTCGAAAGCTGGAGAAGAGCAAGCTTACCTCAATAAGCGCATACGTACCAGAAGAGCAATGCACCTTTTGTTCAGCAACTCTTCCATTTGAGTCCCCAGAAGAAGCCTTTTGCAGAGCCGTAAGTTGCAACAGTGGAGCCAGTAAGGGCCATAGACTAGCCCGGTGCTCGGTCTCTATGCAGGTGAAGTTAATCTTGCTATTGGCTTGTGCTGGAAAACTGGTGGCACTGGAACTCATTGTACAACATGCGCTTAGTAGTTGTACTTGGGGGAAACAATTTGGTGGTACTCCCTTATCGTAA
Network for GWHGAAZE012677
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF12657.8
TFIIIC_delta
14
155
1.80E-16
Protein Sequence
>GWHPAAZE012684 MASRFQAAALVASPSYPNAVAWSDENLLAVASGHLVTILNPAMPFGPRGLITISASKPFSIGLIESKDLLSGSLLPICLTHDVRPGVRSISWSPIGLSPNSGCLLAVCTTEGRVMLYRLPYCEFSAEWVEVMDISEMLYAYLANINYGELNFPSLEYSDGQASKLDSEHGSDDDLPIAVFRKKHKRRRKNALAVINKESGTLRDPPFCSRNSEDVENSSTLCTEVAVFPCSLLQEGSSIEVLIVDGNQRVWVAGKLHQLDGSKALVNFPETDGHGKQDKWVEINPFHSNSDGSNIHNEIMAGQDNCFPVIRPSMDVGNFPEQILSASFHGADDILKIGQTVETWINHRWVEGVLMGLKGSSLEVKLNGDTELVMIDTRYVRLAPRWINEKKSWQVTVVKREIKAQDLRKAASVKSNNPIENNQLQIVSMPNSKSKKRRQTRQNYNSPYIAADKYASRSAMLSSLIVAWSPILEITSDFQLISQKNLLNCCSILAVGAKSGQISFWRIYPQCYSIVQSGDPTFGVLIGLQQAHNSWITAINWAFSVSDPSNPQLLLATGSSDGSVKIWQGYIAELLNSSEDNHASFSLLKEVISVDSVPISVLSLIVPAQSPGQLLLAVGKGSGSLEVWICDLSAHKFDKAGSYDAHDHIVTGLSWALMEIVCIRIMVIFVYQVTVHIFYHLHPYDAHSLNDMLYGLDDSVHSWILQGSTLCQVPMPSNTPGVKSSADVPNVFDSCYGLAVSPGNLARRFDAFLLNPMYQARARKAAVEFFWIGGQKIDILSNRNPDFDMEVLFGFDHNELVYWEHNILWSLNYFENPNRPLVIWDIIAALLAFNDSAPKYVNHILSKWLISCVGPKLGHSPAKMTNLTSRQLQLLNVISRRVVLEEGKEEKVNSKKLGECAFEEEEQTLWREILESSEKELRERLVSFNFGAVIDLISRLSTNFSKSSYWVPVGLAQMEQWVAKNHGHVRDHLKHLASKVRKLEKSKLTSISAYVPEEQCTFCSATLPFESPEEAFCRAVSCNSGASKGHRLARCSVSMQVKLILLLACAGKLVALELIVQHALSSCTWGKQFGGTPLS
Gene family
Gene family
subfamily
Ubiquitin Family
DWD
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
GO:0005515
molecular_function
protein binding
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
4.252
SRR3591706
second leaf
4.132
SRR3591707
mature leaf
5.798
SRR3591708
Shoot apex
8.742
SRR3591709
Stem
5.941
SRR3591710
White floral bud
3.650
SRR3591711
White flower
5.215
SRR3591712
Green floral bud
4.582
SRR3591713
Yellow flower
3.346
SRP173429
SRR8316895
Juvenile bud stage
6.793
SRR8316896
Juvenile bud stage
9.308
SRR8316897
Juvenile bud stage
2.827
SRR8316894
Third green stage
3.327
SRR8316900
Third green stage
5.381
SRR8316901
Third green stage
5.472
SRR8316898
Complete white stage
1.327
SRR8316899
Complete white stage
6.100
SRR8316903
Complete white stage
2.872
SRR8316902
Silver flowering stage
1.962
SRR8316904
Silver flowering stage
2.520
SRR8316905
Silver flowering stage
1.056
SRR8316906
Gold flowering stage
4.475
SRR8316907
Gold flowering stage
3.799
SRR8316908
Gold flowering stage
3.770
SRP132670
SRR6706286
Control
4.688
SRR6706287
Light intensity 50%
4.796
SRR6706288
Light intensity 20%
4.356
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
5.183
CNS0095593
Slightly white alabastrum(diploid) 2
3.161
CNS0095594
Slightly white alabastrum(diploid) 3
3.582
CNS0095595
Whole white alabastrum(diploid) 2
3.196
CNS0095596
Whole white alabastrum(diploid) 3
2.772
CNS0095597
Whole white alabastrum(diploid) 4
2.819
CNS0095598
Silvery flower (diploied) 1
7.581
CNS0095599
Silvery flower (diploied) 2
3.650
CNS0095600
Silvery flower (diploied) 3
4.555
CNS0095601
Golden flower (diploid) 1
4.411
CNS0095602
Golden flower (diploid) 2
5.271
CNS0095603
Golden flower (diploid) 3
4.125
CNS0095604
Slightly white alabastrum(tetraploid) 1
4.632
CNS0095605
Slightly white alabastrum(tetraploid) 2
3.710
CNS0095606
Slightly white alabastrum(tetraploid) 3
8.342
CNS0095607
Whole white alabastrum(tetraploid) 1
3.214
CNS0095608
Whole white alabastrum(tetraploid) 2
2.830
CNS0095609
Whole white alabastrum(tetraploid) 3
5.328
CNS0095610
Silvery flower (tetraploid) 1
4.780
CNS0095611
Silvery flower (tetraploid) 2
5.006
CNS0095612
Silvery flower (tetraploid) 3
3.939
CNS0095613
Golden flower (tetraploid) 1
2.329
CNS0095614
Golden flower (tetraploid) 2
4.419
CNS0095615
Golden flower (tetraploid) 3
2.546
CRA001975
CRR073297
Stem 1
8.902
CRR073298
Stem 2
8.988
CRR073299
Stem 3
3.884
CRR073300
Leaf 1
5.443
CRR073301
Leaf 2
4.407
CRR073302
Leaf 3
3.309
CRR073303
Juvenile bud 1
2.272
CRR073304
Juvenile bud 2
1.299
CRR073305
Juvenile bud 3
3.291
CRR073306
Third green 1
0.597
CRR073307
Third green 2
0.163
CRR073308
Third green 3
1.100
CRR073309
Second white 1
0.731
CRR073310
Second white 2
1.190
CRR073311
Second white 3
1.322
CRR073312
Silver flowering 1
1.049
CRR073313
Silver flowering 2
1.488
CRR073314
Silver flowering 3
1.493
CRR073315
Gold flowering 1
1.759
CRR073316
Gold flowering 2
5.554
CRR073317
Gold flowering 3
2.115
CRR073318
Tawny withering 1
3.145
CRR073319
Tawny withering 2
3.556
CRR073320
Tawny withering 3
2.718