Detail information of GWHGAAZE012688


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273477.15.2968E-166PREDICTED: pyridoxal reductase, chloroplastic isoform X1 [Vitis vinifera]
Swissprottr|Q56Y42|PLR1_ARATH9E-148Pyridoxal reductase, chloroplastic (Precursor)
trEMBLtr|M1BL45|M1BL45_SOLTU1E-161Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400047623}
TAIR10AT5G53580.12E-116NAD(P)-linked oxidoreductase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8986809589874112-
GWHAAZE00000003mRNA8986809589874112-
GWHAAZE00000003exon8986809589868124-
GWHAAZE00000003exon8986854489868657-
GWHAAZE00000003exon8986924489869337-
GWHAAZE00000003exon8986957489869725-
GWHAAZE00000003exon8987217989872302-
GWHAAZE00000003exon8987285389872991-
GWHAAZE00000003exon8987351489873531-
GWHAAZE00000003exon8987361689873844-
GWHAAZE00000003exon8987396089874112-
GWHAAZE00000003CDS8987396089874112-
GWHAAZE00000003CDS8987361689873844-
GWHAAZE00000003CDS8987351489873531-
GWHAAZE00000003CDS8987285389872991-
GWHAAZE00000003CDS8987217989872302-
GWHAAZE00000003CDS8986957489869725-
GWHAAZE00000003CDS8986924489869337-
GWHAAZE00000003CDS8986854489868657-
GWHAAZE00000003CDS8986809589868124-
Transcript Sequence

Network for GWHGAAZE012688

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00248.22Aldo_ket_red612186.70E-19
PF00248.22Aldo_ket_red2213415.70E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05275E1.1.1.65 Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Vitamin B6 metabolismmap00750

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.012
SRR3591706second leaf43.820
SRR3591707mature leaf35.809
SRR3591708Shoot apex18.603
SRR3591709Stem9.569
SRR3591710White floral bud8.145
SRR3591711White flower4.917
SRR3591712Green floral bud8.228
SRR3591713Yellow flower3.523
SRP173429 SRR8316895Juvenile bud stage 11.134
SRR8316896Juvenile bud stage 13.322
SRR8316897Juvenile bud stage 8.380
SRR8316894Third green stage 5.941
SRR8316900Third green stage 17.240
SRR8316901Third green stage 14.873
SRR8316898Complete white stage 4.985
SRR8316899Complete white stage 17.060
SRR8316903Complete white stage 6.121
SRR8316902Silver flowering stage3.488
SRR8316904Silver flowering stage6.083
SRR8316905Silver flowering stage2.736
SRR8316906Gold flowering stage 4.669
SRR8316907Gold flowering stage 4.937
SRR8316908Gold flowering stage 5.519
SRP132670SRR6706286Control12.268
SRR6706287Light intensity 50%13.429
SRR6706288Light intensity 20%15.810
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.991
CNS0095593Slightly white alabastrum(diploid) 210.831
CNS0095594Slightly white alabastrum(diploid) 310.586
CNS0095595Whole white alabastrum(diploid) 29.163
CNS0095596Whole white alabastrum(diploid) 37.548
CNS0095597Whole white alabastrum(diploid) 47.654
CNS0095598Silvery flower (diploied) 111.086
CNS0095599Silvery flower (diploied) 29.418
CNS0095600Silvery flower (diploied) 37.033
CNS0095601Golden flower (diploid) 18.605
CNS0095602Golden flower (diploid) 25.235
CNS0095603Golden flower (diploid) 36.279
CNS0095604Slightly white alabastrum(tetraploid) 111.274
CNS0095605Slightly white alabastrum(tetraploid) 211.162
CNS0095606Slightly white alabastrum(tetraploid) 322.167
CNS0095607Whole white alabastrum(tetraploid) 15.040
CNS0095608Whole white alabastrum(tetraploid) 26.409
CNS0095609Whole white alabastrum(tetraploid) 319.078
CNS0095610Silvery flower (tetraploid) 18.129
CNS0095611Silvery flower (tetraploid) 27.699
CNS0095612Silvery flower (tetraploid) 38.937
CNS0095613Golden flower (tetraploid) 13.856
CNS0095614Golden flower (tetraploid) 26.120
CNS0095615Golden flower (tetraploid) 31.479
CRA001975CRR073297Stem 117.680
CRR073298Stem 215.863
CRR073299Stem 313.705
CRR073300Leaf 114.181
CRR073301Leaf 214.344
CRR073302Leaf 310.405
CRR073303Juvenile bud 18.265
CRR073304Juvenile bud 28.945
CRR073305Juvenile bud 37.559
CRR073306Third green 17.295
CRR073307Third green 23.861
CRR073308Third green 33.505
CRR073309Second white 11.092
CRR073310Second white 21.727
CRR073311Second white 31.009
CRR073312Silver flowering 10.541
CRR073313Silver flowering 21.284
CRR073314Silver flowering 30.652
CRR073315Gold flowering 123.697
CRR073316Gold flowering 232.565
CRR073317Gold flowering 319.956
CRR073318Tawny withering 13.082
CRR073319Tawny withering 24.581
CRR073320Tawny withering 35.171