Detail information of GWHGAAZE012797


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011076473.11.4955E-18PREDICTED: uncharacterized protein LOC105160690 [Sesamum indicum]
trEMBLtr|A0A022QF81|A0A022QF81_ERYGU5E-17Uncharacterized protein {ECO:0000313|EMBL:EYU25165.1}
TAIR10AT1G64065.10.0002Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9167434091674549-
GWHAAZE00000003mRNA9167434091674549-
GWHAAZE00000003exon9167434091674549-
GWHAAZE00000003CDS9167434091674549-
Transcript Sequence

Network for GWHGAAZE012797

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0079


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.956
SRR3591706second leaf7.317
SRR3591707mature leaf38.634
SRR3591708Shoot apex3.152
SRR3591709Stem50.504
SRR3591710White floral bud35.283
SRR3591711White flower51.939
SRR3591712Green floral bud24.895
SRR3591713Yellow flower54.201
SRP173429 SRR8316895Juvenile bud stage 5.627
SRR8316896Juvenile bud stage 4.396
SRR8316897Juvenile bud stage 4.790
SRR8316894Third green stage 2.763
SRR8316900Third green stage 1.083
SRR8316901Third green stage 2.363
SRR8316898Complete white stage 1.645
SRR8316899Complete white stage 16.507
SRR8316903Complete white stage 2.335
SRR8316902Silver flowering stage5.156
SRR8316904Silver flowering stage6.862
SRR8316905Silver flowering stage2.049
SRR8316906Gold flowering stage 55.190
SRR8316907Gold flowering stage 26.657
SRR8316908Gold flowering stage 81.055
SRP132670SRR6706286Control6.093
SRR6706287Light intensity 50%6.032
SRR6706288Light intensity 20%2.467
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.020
CNS0095593Slightly white alabastrum(diploid) 246.414
CNS0095594Slightly white alabastrum(diploid) 342.640
CNS0095595Whole white alabastrum(diploid) 223.446
CNS0095596Whole white alabastrum(diploid) 31.051
CNS0095597Whole white alabastrum(diploid) 426.781
CNS0095598Silvery flower (diploied) 183.861
CNS0095599Silvery flower (diploied) 257.103
CNS0095600Silvery flower (diploied) 316.385
CNS0095601Golden flower (diploid) 1109.437
CNS0095602Golden flower (diploid) 238.444
CNS0095603Golden flower (diploid) 327.184
CNS0095604Slightly white alabastrum(tetraploid) 10.084
CNS0095605Slightly white alabastrum(tetraploid) 22.277
CNS0095606Slightly white alabastrum(tetraploid) 32.175
CNS0095607Whole white alabastrum(tetraploid) 10.819
CNS0095608Whole white alabastrum(tetraploid) 21.987
CNS0095609Whole white alabastrum(tetraploid) 30.474
CNS0095610Silvery flower (tetraploid) 12.144
CNS0095611Silvery flower (tetraploid) 21.893
CNS0095612Silvery flower (tetraploid) 31.486
CNS0095613Golden flower (tetraploid) 14.436
CNS0095614Golden flower (tetraploid) 23.797
CNS0095615Golden flower (tetraploid) 30.232
CRA001975CRR073297Stem 10.613
CRR073298Stem 21.728
CRR073299Stem 31.345
CRR073300Leaf 10.191
CRR073301Leaf 23.049
CRR073302Leaf 30.434
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.531
CRR073307Third green 20.690
CRR073308Third green 30.543
CRR073309Second white 11.882
CRR073310Second white 22.005
CRR073311Second white 34.425
CRR073312Silver flowering 116.659
CRR073313Silver flowering 27.416
CRR073314Silver flowering 311.810
CRR073315Gold flowering 111.896
CRR073316Gold flowering 28.684
CRR073317Gold flowering 328.977
CRR073318Tawny withering 154.078
CRR073319Tawny withering 2114.627
CRR073320Tawny withering 315.462