Detail information of GWHGAAZE012799


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007038868.12.72813E-48Late embryogenesis abundant hydroxyproline-rich glycofamily protein, putative [Theobroma cacao]
trEMBLtr|A0A061G8I8|A0A061G8I8_THECC1E-48Late embryogenesis abundant hydroxyproline-rich glycofamily protein, putative {ECO:0000313|EMBL:EOY23369.1}
TAIR10AT2G46150.17E-20Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9168803291688478-
GWHAAZE00000003mRNA9168803291688478-
GWHAAZE00000003exon9168803291688478-
GWHAAZE00000003CDS9168803291688478-
Transcript Sequence

Network for GWHGAAZE012799

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0079


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03168.14LEA_2331321.30E-10
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.822
SRR3591706second leaf6.475
SRR3591707mature leaf1.040
SRR3591708Shoot apex2.350
SRR3591709Stem15.165
SRR3591710White floral bud4.988
SRR3591711White flower11.498
SRR3591712Green floral bud5.692
SRR3591713Yellow flower12.432
SRP173429 SRR8316895Juvenile bud stage 8.767
SRR8316896Juvenile bud stage 5.357
SRR8316897Juvenile bud stage 8.973
SRR8316894Third green stage 2.751
SRR8316900Third green stage 2.676
SRR8316901Third green stage 4.155
SRR8316898Complete white stage 0.242
SRR8316899Complete white stage 3.630
SRR8316903Complete white stage 1.787
SRR8316902Silver flowering stage1.449
SRR8316904Silver flowering stage1.460
SRR8316905Silver flowering stage0.893
SRR8316906Gold flowering stage 8.577
SRR8316907Gold flowering stage 4.128
SRR8316908Gold flowering stage 17.046
SRP132670SRR6706286Control5.226
SRR6706287Light intensity 50%5.730
SRR6706288Light intensity 20%3.752
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.997
CNS0095593Slightly white alabastrum(diploid) 220.013
CNS0095594Slightly white alabastrum(diploid) 317.156
CNS0095595Whole white alabastrum(diploid) 213.307
CNS0095596Whole white alabastrum(diploid) 32.112
CNS0095597Whole white alabastrum(diploid) 45.676
CNS0095598Silvery flower (diploied) 18.999
CNS0095599Silvery flower (diploied) 226.106
CNS0095600Silvery flower (diploied) 37.924
CNS0095601Golden flower (diploid) 127.503
CNS0095602Golden flower (diploid) 213.322
CNS0095603Golden flower (diploid) 313.666
CNS0095604Slightly white alabastrum(tetraploid) 11.065
CNS0095605Slightly white alabastrum(tetraploid) 20.501
CNS0095606Slightly white alabastrum(tetraploid) 36.706
CNS0095607Whole white alabastrum(tetraploid) 10.104
CNS0095608Whole white alabastrum(tetraploid) 20.423
CNS0095609Whole white alabastrum(tetraploid) 32.447
CNS0095610Silvery flower (tetraploid) 10.600
CNS0095611Silvery flower (tetraploid) 20.483
CNS0095612Silvery flower (tetraploid) 30.936
CNS0095613Golden flower (tetraploid) 11.081
CNS0095614Golden flower (tetraploid) 20.692
CNS0095615Golden flower (tetraploid) 30.487
CRA001975CRR073297Stem 10.974
CRR073298Stem 20.701
CRR073299Stem 32.841
CRR073300Leaf 11.728
CRR073301Leaf 20.889
CRR073302Leaf 30.627
CRR073303Juvenile bud 10.774
CRR073304Juvenile bud 20.126
CRR073305Juvenile bud 30.490
CRR073306Third green 11.087
CRR073307Third green 20.395
CRR073308Third green 30.631
CRR073309Second white 11.469
CRR073310Second white 21.719
CRR073311Second white 30.725
CRR073312Silver flowering 14.942
CRR073313Silver flowering 24.016
CRR073314Silver flowering 33.180
CRR073315Gold flowering 10.989
CRR073316Gold flowering 20.754
CRR073317Gold flowering 36.296
CRR073318Tawny withering 118.804
CRR073319Tawny withering 239.997
CRR073320Tawny withering 38.793