Gene detail

Detail information of GWHGAAZE012840

Functional Annotation

Database	Orthologs	Annotation
Nr	CBI25018.3	unnamed protein product [Vitis vinifera]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	Exocyst complex component EXO70A1
trEMBL	tr\|F6HBF9\|F6HBF9_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB49568.1}
TAIR10	AT5G03540.1	exocyst subunit exo70 family protein A1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	92371936	92383448	+
GWHAAZE00000003	mRNA	92371936	92383448	+
GWHAAZE00000003	exon	92371936	92372174	+
GWHAAZE00000003	exon	92373180	92373275	+
GWHAAZE00000003	exon	92374856	92375061	+
GWHAAZE00000003	exon	92376156	92376389	+
GWHAAZE00000003	exon	92377267	92377405	+
GWHAAZE00000003	exon	92378215	92378427	+
GWHAAZE00000003	exon	92379422	92379627	+
GWHAAZE00000003	exon	92380680	92380880	+
GWHAAZE00000003	exon	92381004	92381103	+
GWHAAZE00000003	exon	92381799	92381908	+
GWHAAZE00000003	exon	92382233	92382379	+
GWHAAZE00000003	exon	92383331	92383448	+
GWHAAZE00000003	five_prime_UTR	92371936	92372036	+
GWHAAZE00000003	CDS	92372037	92372174	+
GWHAAZE00000003	CDS	92373180	92373275	+
GWHAAZE00000003	CDS	92374856	92375061	+
GWHAAZE00000003	CDS	92376156	92376389	+
GWHAAZE00000003	CDS	92377267	92377405	+
GWHAAZE00000003	CDS	92378215	92378427	+
GWHAAZE00000003	CDS	92379422	92379627	+
GWHAAZE00000003	CDS	92380680	92380880	+
GWHAAZE00000003	CDS	92381004	92381103	+
GWHAAZE00000003	CDS	92381799	92381908	+
GWHAAZE00000003	CDS	92382233	92382379	+
GWHAAZE00000003	CDS	92383331	92383448	+

Transcript Sequence
>GWHTAAZE012854 GCCACTCTCTCTTTCTCTTCTTTCCCACACACAGTAGACACAGAAAAATCCTTCAAATCACAACACAGAGAGAGAGAGAAAATGGGGTTCAAGTTGCGGATATGGTGCTGAGCGAAAGAGCGGCGATGATGAGAGAATCACTGCAGCAGAGTCAGTCCTTCACCGATAACATGGTCTCCATTTTGGGCTCCTTTGACCACCGTCTCTCCGCCCTCGAGACCGCCATGCGTCCCACTCAGATTAGAACACATGCGATTCGCGGAGCCCATGAGAACATTGATAAAACTTTAAAGGCTGCAGAGGTTATACTGGCTCAATTTGATCTTTCTCGTCAGGCGGAGGTTAAAATACTTAAAGGGCCACAGGATGATCTGGAAAGTTATCTTGGAGCAATTGAACAGCTAAGAAGCAACATTAAATTCTTTAGCAACAATAAAAGCTTTAAGAGTAGTGATGGGGTGGTCAACCATGCAAATAACTTGCTTTCTAAGGCTATTTCTAAGTTGGAAGAGGAGTTTAAGCAGCTTTTATCATCTTACAGCAAACCTGTGGAACCAGATCGTCTTTTTGAGTGCCTTCCCAATTCCCTAAGGCCATCAGCTGGATCACCTGGACACCCTCCTGCATCCCATGGCCATGCTGAACACCAATTATCAGCAGATGCTACTTACACACCACCAACTCTTATACCACCTCGGGTTCTCCCATTGCTTCATGATTTAGCCCAACAAATGGTTCAAGCAGGCCACCAACAGCAGCTACTTATAATATACAGGAGCACCCGTTCTTCAGTCTTGGAGGAAAGCCTTCGCAAGTTAGGAGTGGAAAAACTTAGCAAAGAGGATGTTCAGAAGATGCAATGGGAGGTTTTGGAAGCTAAGATTGGCAATTGGATCCATTTCATGCGAATCGCTGTCAAATTGCTGTTTGCTGGGGAGCGAAAAGTTTGTGATCAAATGTTTGAAGGCATGGATTCCCTTAGGGATCAATGTTTTGCTGAAGTTACTGCTGGTAGTGTTTCAGTGCTACTTAGTTTTGGAGATGCAATCGCGAAAAGCAAGAGATCACCAGAAAAGTTATTTGTGCTTTTAGATATGTATGAGATTATGCGAGAACTTCATTCAGAGATTGAAACCCTTTTCAAAGGTAAAGCTTGCAATGAAATTAGAGAATCTGCATTGGGATTGACAAAGAGACTTGCTCAGACGGCCCAAGAAACTTTCGGTGATTTTGAAGAAGCAGTTGAAAAAGATGCAACTAAAACTGCTGTGTCAGATGGAACCGTCCATCCTTTGACAAGTTATGTGATCAACTATGTGAAGTTCCTCTTTGACTATCAATCAACCTTGAAGCAACTTTTCCAAGAATTTGAAAATGGAGGAGAATCAAATTCTCAGCTGGCCTCTGTAACAATGCGAATTATGCAGGCTCTTCAAATCAATTTGGAGGGTAAATCCAAGCAGTACAGAGATATTCCTCTCACTCACTTGTTTCTTATGAACAACATCCACTATATGGTCAGATCTGTGCGCAGGTCTGAAGCTAAGGATTTGTTAGGAGATGACTGGGTGCAAAGACACCGGAGAATTGTGCAACAACATGCAAATCAGTACAAGAGGATTGGTTGGGCTAAGATCCTGCAGTGTCTCTCTATTCAAGGTCTGACTTCATCAGGAGGTGGTAGTTCGGTTGGTGTTGACGGAGTAAATAGTAGTGGAGTATCAAGAGCAATCGTAAAAGACAGGTTGAAGATATTCAATGGGCAGTTTGAGGAGCTTCATCAAAGACAATCTCAGTGGACAGTTCCAGACACGGAGTTGCGAGAATCTCTGAGGCTTGCAGTTGCTGAAGTCTTGTTGCCAGCTTATCGATCTTTCATTAAACGCTTCGGGCCTTTGGTCGAGAATGGAAAGAATCCCCAGAAATACATCAGGTACACACCAGAAGATCTTGATCGAATGCTCGGTGAATTTTTTGAGGGTAAGACTGTAAATGAGCCTAGGCGGTAG

Network for GWHGAAZE012840

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	263	622	6.10E-124

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	42.246
	SRR3591706	second leaf	20.894
	SRR3591707	mature leaf	20.446
	SRR3591708	Shoot apex	22.501
	SRR3591709	Stem	30.328
	SRR3591710	White floral bud	40.126
	SRR3591711	White flower	48.849
	SRR3591712	Green floral bud	29.560
	SRR3591713	Yellow flower	43.869
SRP173429	SRR8316895	Juvenile bud stage	20.205
	SRR8316896	Juvenile bud stage	25.994
	SRR8316897	Juvenile bud stage	12.306
	SRR8316894	Third green stage	11.737
	SRR8316900	Third green stage	35.937
	SRR8316901	Third green stage	37.669
	SRR8316898	Complete white stage	23.055
	SRR8316899	Complete white stage	44.915
	SRR8316903	Complete white stage	41.592
	SRR8316902	Silver flowering stage	28.988
	SRR8316904	Silver flowering stage	43.976
	SRR8316905	Silver flowering stage	23.000
	SRR8316906	Gold flowering stage	72.795
	SRR8316907	Gold flowering stage	59.283
	SRR8316908	Gold flowering stage	62.958
SRP132670	SRR6706286	Control	44.779
	SRR6706287	Light intensity 50%	46.410
	SRR6706288	Light intensity 20%	48.633
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	14.485
	CNS0095593	Slightly white alabastrum(diploid) 2	16.098
	CNS0095594	Slightly white alabastrum(diploid) 3	14.058
	CNS0095595	Whole white alabastrum(diploid) 2	13.322
	CNS0095596	Whole white alabastrum(diploid) 3	13.221
	CNS0095597	Whole white alabastrum(diploid) 4	14.550
	CNS0095598	Silvery flower (diploied) 1	20.622
	CNS0095599	Silvery flower (diploied) 2	19.827
	CNS0095600	Silvery flower (diploied) 3	45.457
	CNS0095601	Golden flower (diploid) 1	18.151
	CNS0095602	Golden flower (diploid) 2	34.149
	CNS0095603	Golden flower (diploid) 3	36.299
	CNS0095604	Slightly white alabastrum(tetraploid) 1	15.264
	CNS0095605	Slightly white alabastrum(tetraploid) 2	13.095
	CNS0095606	Slightly white alabastrum(tetraploid) 3	37.521
	CNS0095607	Whole white alabastrum(tetraploid) 1	10.890
	CNS0095608	Whole white alabastrum(tetraploid) 2	9.375
	CNS0095609	Whole white alabastrum(tetraploid) 3	28.779
	CNS0095610	Silvery flower (tetraploid) 1	45.265
	CNS0095611	Silvery flower (tetraploid) 2	44.593
	CNS0095612	Silvery flower (tetraploid) 3	47.262
	CNS0095613	Golden flower (tetraploid) 1	18.462
	CNS0095614	Golden flower (tetraploid) 2	31.118
	CNS0095615	Golden flower (tetraploid) 3	36.131
CRA001975	CRR073297	Stem 1	29.770
	CRR073298	Stem 2	28.222
	CRR073299	Stem 3	24.882
	CRR073300	Leaf 1	37.561
	CRR073301	Leaf 2	36.625
	CRR073302	Leaf 3	34.374
	CRR073303	Juvenile bud 1	34.916
	CRR073304	Juvenile bud 2	34.222
	CRR073305	Juvenile bud 3	40.338
	CRR073306	Third green 1	51.816
	CRR073307	Third green 2	40.938
	CRR073308	Third green 3	43.028
	CRR073309	Second white 1	31.414
	CRR073310	Second white 2	29.879
	CRR073311	Second white 3	28.002
	CRR073312	Silver flowering 1	20.413
	CRR073313	Silver flowering 2	16.465
	CRR073314	Silver flowering 3	19.766
	CRR073315	Gold flowering 1	18.516
	CRR073316	Gold flowering 2	26.197
	CRR073317	Gold flowering 3	16.772
	CRR073318	Tawny withering 1	27.281
	CRR073319	Tawny withering 2	22.312
	CRR073320	Tawny withering 3	24.331