Detail information of GWHGAAZE012895


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011077238.10PREDICTED: mRNA cap guanine-N7 methyltransferase 2 [Sesamum indicum]
Swissprottr|Q5HZ60|MCES2_ARATH1E-174mRNA cap guanine-N7 methyltransferase 2
trEMBLtr|A0A068TWV3|A0A068TWV3_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_4 {ECO:0000313|EMBL:CDO99843.1}
TAIR10AT3G52210.14E-140S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9338205393388787-
GWHAAZE00000003mRNA9338205393388787-
GWHAAZE00000003exon9338205393382193-
GWHAAZE00000003exon9338242793382536-
GWHAAZE00000003exon9338284093382928-
GWHAAZE00000003exon9338387293383940-
GWHAAZE00000003exon9338490093384992-
GWHAAZE00000003exon9338507393385195-
GWHAAZE00000003exon9338713193387240-
GWHAAZE00000003exon9338735293387423-
GWHAAZE00000003exon9338831793388411-
GWHAAZE00000003exon9338851793388595-
GWHAAZE00000003exon9338868693388787-
GWHAAZE00000003CDS9338868693388787-
GWHAAZE00000003CDS9338851793388595-
GWHAAZE00000003CDS9338831793388411-
GWHAAZE00000003CDS9338735293387423-
GWHAAZE00000003CDS9338713193387240-
GWHAAZE00000003CDS9338507393385195-
GWHAAZE00000003CDS9338490093384992-
GWHAAZE00000003CDS9338387293383940-
GWHAAZE00000003CDS9338284093382928-
GWHAAZE00000003CDS9338242793382536-
GWHAAZE00000003CDS9338205393382193-
Transcript Sequence

Network for GWHGAAZE012895

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03291.17Pox_MCEL132572.20E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00565RNMT mRNA surveillance pathway map03015

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf27.261
SRR3591706second leaf18.662
SRR3591707mature leaf17.107
SRR3591708Shoot apex33.144
SRR3591709Stem26.661
SRR3591710White floral bud20.487
SRR3591711White flower19.677
SRR3591712Green floral bud21.275
SRR3591713Yellow flower15.875
SRP173429 SRR8316895Juvenile bud stage 26.235
SRR8316896Juvenile bud stage 29.642
SRR8316897Juvenile bud stage 16.009
SRR8316894Third green stage 11.156
SRR8316900Third green stage 25.824
SRR8316901Third green stage 25.491
SRR8316898Complete white stage 9.068
SRR8316899Complete white stage 28.557
SRR8316903Complete white stage 16.688
SRR8316902Silver flowering stage8.052
SRR8316904Silver flowering stage12.482
SRR8316905Silver flowering stage4.743
SRR8316906Gold flowering stage 20.018
SRR8316907Gold flowering stage 15.160
SRR8316908Gold flowering stage 17.675
SRP132670SRR6706286Control21.642
SRR6706287Light intensity 50%24.474
SRR6706288Light intensity 20%25.653
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.009
CNS0095593Slightly white alabastrum(diploid) 223.011
CNS0095594Slightly white alabastrum(diploid) 321.703
CNS0095595Whole white alabastrum(diploid) 217.063
CNS0095596Whole white alabastrum(diploid) 316.923
CNS0095597Whole white alabastrum(diploid) 415.927
CNS0095598Silvery flower (diploied) 125.986
CNS0095599Silvery flower (diploied) 216.478
CNS0095600Silvery flower (diploied) 312.522
CNS0095601Golden flower (diploid) 119.324
CNS0095602Golden flower (diploid) 214.748
CNS0095603Golden flower (diploid) 315.741
CNS0095604Slightly white alabastrum(tetraploid) 124.210
CNS0095605Slightly white alabastrum(tetraploid) 224.385
CNS0095606Slightly white alabastrum(tetraploid) 337.680
CNS0095607Whole white alabastrum(tetraploid) 114.653
CNS0095608Whole white alabastrum(tetraploid) 210.914
CNS0095609Whole white alabastrum(tetraploid) 322.192
CNS0095610Silvery flower (tetraploid) 119.601
CNS0095611Silvery flower (tetraploid) 216.759
CNS0095612Silvery flower (tetraploid) 320.363
CNS0095613Golden flower (tetraploid) 114.325
CNS0095614Golden flower (tetraploid) 217.061
CNS0095615Golden flower (tetraploid) 313.068
CRA001975CRR073297Stem 129.026
CRR073298Stem 226.211
CRR073299Stem 315.268
CRR073300Leaf 126.203
CRR073301Leaf 221.046
CRR073302Leaf 317.132
CRR073303Juvenile bud 110.818
CRR073304Juvenile bud 29.181
CRR073305Juvenile bud 313.699
CRR073306Third green 15.789
CRR073307Third green 25.057
CRR073308Third green 35.762
CRR073309Second white 15.027
CRR073310Second white 25.176
CRR073311Second white 34.725
CRR073312Silver flowering 13.039
CRR073313Silver flowering 24.894
CRR073314Silver flowering 34.393
CRR073315Gold flowering 18.467
CRR073316Gold flowering 211.197
CRR073317Gold flowering 35.846
CRR073318Tawny withering 113.923
CRR073319Tawny withering 210.513
CRR073320Tawny withering 311.601