Detail information of GWHGAAZE012955


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007205214.10hypothetical protein PRUPE_ppa005902mg [Prunus persica]
Swissprottr|Q9LZW4|CIPKE_ARATH0CBL-interacting serine/threonine-protein kinase 14
trEMBLtr|M5WAX9|M5WAX9_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ06413.1}
TAIR10AT5G01820.14E-143serine/threonine protein kinase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9422778894229035+
GWHAAZE00000003mRNA9422778894229035+
GWHAAZE00000003exon9422778894229035+
GWHAAZE00000003CDS9422778894229035+
Transcript Sequence

Network for GWHGAAZE012955

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase72617.20E-73
PF03822.15NAF2893455.30E-20
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CAMKL-CHK1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007165biological_processsignal transduction
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE012955.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 3020406080100120140160180200220240Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf123.028
SRR3591706second leaf103.996
SRR3591707mature leaf76.725
SRR3591708Shoot apex89.654
SRR3591709Stem69.122
SRR3591710White floral bud73.357
SRR3591711White flower55.349
SRR3591712Green floral bud73.366
SRR3591713Yellow flower36.835
SRP173429 SRR8316895Juvenile bud stage 32.506
SRR8316896Juvenile bud stage 25.428
SRR8316897Juvenile bud stage 31.574
SRR8316894Third green stage 15.601
SRR8316900Third green stage 37.382
SRR8316901Third green stage 45.418
SRR8316898Complete white stage 18.025
SRR8316899Complete white stage 124.810
SRR8316903Complete white stage 25.817
SRR8316902Silver flowering stage8.919
SRR8316904Silver flowering stage6.234
SRR8316905Silver flowering stage6.511
SRR8316906Gold flowering stage 26.866
SRR8316907Gold flowering stage 23.664
SRR8316908Gold flowering stage 17.766
SRP132670SRR6706286Control54.614
SRR6706287Light intensity 50%49.956
SRR6706288Light intensity 20%49.591
CNP0000432CNS0095592Slightly white alabastrum(diploid) 140.016
CNS0095593Slightly white alabastrum(diploid) 234.816
CNS0095594Slightly white alabastrum(diploid) 339.767
CNS0095595Whole white alabastrum(diploid) 229.928
CNS0095596Whole white alabastrum(diploid) 323.129
CNS0095597Whole white alabastrum(diploid) 427.161
CNS0095598Silvery flower (diploied) 158.197
CNS0095599Silvery flower (diploied) 258.521
CNS0095600Silvery flower (diploied) 343.349
CNS0095601Golden flower (diploid) 154.280
CNS0095602Golden flower (diploid) 255.272
CNS0095603Golden flower (diploid) 356.641
CNS0095604Slightly white alabastrum(tetraploid) 120.482
CNS0095605Slightly white alabastrum(tetraploid) 221.551
CNS0095606Slightly white alabastrum(tetraploid) 342.933
CNS0095607Whole white alabastrum(tetraploid) 113.883
CNS0095608Whole white alabastrum(tetraploid) 215.321
CNS0095609Whole white alabastrum(tetraploid) 331.718
CNS0095610Silvery flower (tetraploid) 113.833
CNS0095611Silvery flower (tetraploid) 214.491
CNS0095612Silvery flower (tetraploid) 333.311
CNS0095613Golden flower (tetraploid) 16.694
CNS0095614Golden flower (tetraploid) 211.644
CNS0095615Golden flower (tetraploid) 37.672
CRA001975CRR073297Stem 174.752
CRR073298Stem 278.219
CRR073299Stem 395.029
CRR073300Leaf 197.682
CRR073301Leaf 2119.222
CRR073302Leaf 392.907
CRR073303Juvenile bud 1112.010
CRR073304Juvenile bud 2148.045
CRR073305Juvenile bud 3214.408
CRR073306Third green 1193.364
CRR073307Third green 2153.656
CRR073308Third green 3159.436
CRR073309Second white 1121.250
CRR073310Second white 2101.610
CRR073311Second white 396.894
CRR073312Silver flowering 1149.981
CRR073313Silver flowering 2170.899
CRR073314Silver flowering 3109.712
CRR073315Gold flowering 1111.804
CRR073316Gold flowering 2120.977
CRR073317Gold flowering 3107.723
CRR073318Tawny withering 148.960
CRR073319Tawny withering 261.571
CRR073320Tawny withering 346.455