Detail information of GWHGAAZE012998


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU41916.10hypothetical protein MIMGU_mgv1a005306mg [Erythranthe guttata]
Swissprottr|Q96329|ACOX4_ARATH0Acyl-coenzyme A oxidase 4, peroxisomal
trEMBLtr|A0A022RPJ4|A0A022RPJ4_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU41916.1}
TAIR10AT3G51840.15E-150acyl-CoA oxidase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9504908595060563-
GWHAAZE00000003mRNA9504908595060563-
GWHAAZE00000003exon9506051095060563-
GWHAAZE00000003exon9506028695060384-
GWHAAZE00000003exon9505985595059932-
GWHAAZE00000003exon9505964295059765-
GWHAAZE00000003exon9505946595059538-
GWHAAZE00000003exon9505925495059364-
GWHAAZE00000003exon9505906295059168-
GWHAAZE00000003exon9505793695058112-
GWHAAZE00000003exon9505653295056703-
GWHAAZE00000003exon9504908595049216-
GWHAAZE00000003CDS9506051095060563-
GWHAAZE00000003CDS9506028695060384-
GWHAAZE00000003CDS9505985595059932-
GWHAAZE00000003CDS9505964295059765-
GWHAAZE00000003CDS9505946595059538-
GWHAAZE00000003CDS9505925495059364-
GWHAAZE00000003CDS9505906295059168-
GWHAAZE00000003CDS9505793695058112-
GWHAAZE00000003CDS9505653295056703-
GWHAAZE00000003CDS9504908595049216-
Transcript Sequence

Network for GWHGAAZE012998

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02771.17Acyl-CoA_dh_N281361.40E-21
PF02770.20Acyl-CoA_dh_M1422503.60E-11
PF00441.25Acyl-CoA_dh_12733351.40E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00232E1.3.3.6, ACOX1, ACOX3 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carbon metabolismmap01200
Fatty acid metabolismmap01212
Propanoate metabolismmap00640
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592
Biosynthesis of unsaturated fatty acidsmap01040
beta-Alanine metabolismmap00410
cAMP signaling pathwaymap04024
Peroxisomemap04146
PPAR signaling pathwaymap03320

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
GO:0050660molecular_functionflavin adenine dinucleotide binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.818
SRR3591706second leaf8.206
SRR3591707mature leaf8.604
SRR3591708Shoot apex5.429
SRR3591709Stem17.349
SRR3591710White floral bud36.673
SRR3591711White flower44.701
SRR3591712Green floral bud23.089
SRR3591713Yellow flower59.366
SRP173429 SRR8316895Juvenile bud stage 10.723
SRR8316896Juvenile bud stage 13.592
SRR8316897Juvenile bud stage 6.710
SRR8316894Third green stage 4.387
SRR8316900Third green stage 17.717
SRR8316901Third green stage 22.722
SRR8316898Complete white stage 24.201
SRR8316899Complete white stage 33.344
SRR8316903Complete white stage 29.099
SRR8316902Silver flowering stage47.424
SRR8316904Silver flowering stage57.905
SRR8316905Silver flowering stage27.682
SRR8316906Gold flowering stage 108.434
SRR8316907Gold flowering stage 83.968
SRR8316908Gold flowering stage 94.523
SRP132670SRR6706286Control9.996
SRR6706287Light intensity 50%10.824
SRR6706288Light intensity 20%10.235
CNP0000432CNS0095592Slightly white alabastrum(diploid) 116.773
CNS0095593Slightly white alabastrum(diploid) 221.641
CNS0095594Slightly white alabastrum(diploid) 314.459
CNS0095595Whole white alabastrum(diploid) 215.594
CNS0095596Whole white alabastrum(diploid) 317.826
CNS0095597Whole white alabastrum(diploid) 416.744
CNS0095598Silvery flower (diploied) 121.953
CNS0095599Silvery flower (diploied) 222.492
CNS0095600Silvery flower (diploied) 356.396
CNS0095601Golden flower (diploid) 117.127
CNS0095602Golden flower (diploid) 225.004
CNS0095603Golden flower (diploid) 323.926
CNS0095604Slightly white alabastrum(tetraploid) 116.312
CNS0095605Slightly white alabastrum(tetraploid) 213.634
CNS0095606Slightly white alabastrum(tetraploid) 318.349
CNS0095607Whole white alabastrum(tetraploid) 110.872
CNS0095608Whole white alabastrum(tetraploid) 213.095
CNS0095609Whole white alabastrum(tetraploid) 315.943
CNS0095610Silvery flower (tetraploid) 169.470
CNS0095611Silvery flower (tetraploid) 264.286
CNS0095612Silvery flower (tetraploid) 355.456
CNS0095613Golden flower (tetraploid) 170.586
CNS0095614Golden flower (tetraploid) 268.440
CNS0095615Golden flower (tetraploid) 330.516
CRA001975CRR073297Stem 115.363
CRR073298Stem 211.458
CRR073299Stem 313.985
CRR073300Leaf 118.428
CRR073301Leaf 217.334
CRR073302Leaf 320.879
CRR073303Juvenile bud 120.457
CRR073304Juvenile bud 213.371
CRR073305Juvenile bud 323.315
CRR073306Third green 171.653
CRR073307Third green 248.670
CRR073308Third green 357.585
CRR073309Second white 174.312
CRR073310Second white 268.746
CRR073311Second white 352.569
CRR073312Silver flowering 159.601
CRR073313Silver flowering 245.875
CRR073314Silver flowering 353.730
CRR073315Gold flowering 15.246
CRR073316Gold flowering 28.974
CRR073317Gold flowering 36.973
CRR073318Tawny withering 111.630
CRR073319Tawny withering 212.868
CRR073320Tawny withering 38.915