Detail information of GWHGAAZE013011


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP24448.10hypothetical protein JCGZ_25012 [Jatropha curcas]
Swissprottr|Q39963|PDX1_HEVBR0Probable pyridoxal biosynthesis protein PDX1
trEMBLtr|A0A067JNQ7|A0A067JNQ7_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP24448.1}
TAIR10AT5G01410.15E-154Aldolase-type TIM barrel family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9531255795313833-
GWHAAZE00000003mRNA9531255795313833-
GWHAAZE00000003exon9531255795312853-
GWHAAZE00000003exon9531320195313833-
GWHAAZE00000003CDS9531320195313833-
GWHAAZE00000003CDS9531255795312853-
Transcript Sequence

Network for GWHGAAZE013011

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01680.18SOR_SNZ232282.00E-112
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06215pdxS, pdx1 Vitamin B6 metabolism map00750

Gene Ontology

GO term OntologyName
GO:0042819biological_processvitamin B6 biosynthetic process
GO:0042823biological_processpyridoxal phosphate biosynthetic process
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf79.092
SRR3591706second leaf334.860
SRR3591707mature leaf1052.761
SRR3591708Shoot apex112.652
SRR3591709Stem58.415
SRR3591710White floral bud107.146
SRR3591711White flower202.997
SRR3591712Green floral bud99.511
SRR3591713Yellow flower121.937
SRP173429 SRR8316895Juvenile bud stage 104.642
SRR8316896Juvenile bud stage 136.050
SRR8316897Juvenile bud stage 70.264
SRR8316894Third green stage 56.878
SRR8316900Third green stage 198.901
SRR8316901Third green stage 233.704
SRR8316898Complete white stage 85.309
SRR8316899Complete white stage 268.088
SRR8316903Complete white stage 114.386
SRR8316902Silver flowering stage144.419
SRR8316904Silver flowering stage138.925
SRR8316905Silver flowering stage83.552
SRR8316906Gold flowering stage 253.169
SRR8316907Gold flowering stage 281.936
SRR8316908Gold flowering stage 300.624
SRP132670SRR6706286Control318.399
SRR6706287Light intensity 50%290.799
SRR6706288Light intensity 20%286.053
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1174.881
CNS0095593Slightly white alabastrum(diploid) 2180.700
CNS0095594Slightly white alabastrum(diploid) 3181.442
CNS0095595Whole white alabastrum(diploid) 2179.725
CNS0095596Whole white alabastrum(diploid) 3142.273
CNS0095597Whole white alabastrum(diploid) 4166.145
CNS0095598Silvery flower (diploied) 1304.801
CNS0095599Silvery flower (diploied) 2290.107
CNS0095600Silvery flower (diploied) 3435.864
CNS0095601Golden flower (diploid) 1270.897
CNS0095602Golden flower (diploid) 2421.581
CNS0095603Golden flower (diploid) 3410.760
CNS0095604Slightly white alabastrum(tetraploid) 1222.265
CNS0095605Slightly white alabastrum(tetraploid) 2207.692
CNS0095606Slightly white alabastrum(tetraploid) 3373.239
CNS0095607Whole white alabastrum(tetraploid) 1161.746
CNS0095608Whole white alabastrum(tetraploid) 2174.754
CNS0095609Whole white alabastrum(tetraploid) 3286.548
CNS0095610Silvery flower (tetraploid) 11047.250
CNS0095611Silvery flower (tetraploid) 2994.657
CNS0095612Silvery flower (tetraploid) 3221.128
CNS0095613Golden flower (tetraploid) 1484.420
CNS0095614Golden flower (tetraploid) 2601.107
CNS0095615Golden flower (tetraploid) 3129.027
CRA001975CRR073297Stem 1150.160
CRR073298Stem 2137.946
CRR073299Stem 3225.505
CRR073300Leaf 1168.280
CRR073301Leaf 2167.307
CRR073302Leaf 3190.309
CRR073303Juvenile bud 1302.214
CRR073304Juvenile bud 2337.251
CRR073305Juvenile bud 3347.110
CRR073306Third green 1400.002
CRR073307Third green 2280.616
CRR073308Third green 3311.752
CRR073309Second white 1488.273
CRR073310Second white 2458.591
CRR073311Second white 3339.302
CRR073312Silver flowering 1306.724
CRR073313Silver flowering 2394.545
CRR073314Silver flowering 3296.706
CRR073315Gold flowering 11035.488
CRR073316Gold flowering 2877.386
CRR073317Gold flowering 31052.396
CRR073318Tawny withering 165.289
CRR073319Tawny withering 274.998
CRR073320Tawny withering 373.243