Detail information of GWHGAAZE013060


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007026871.15.72577E-59Proteasome inhibitor-related [Theobroma cacao]
Swissprottr|Q9M330|PSMF1_ARATH5E-46Probable proteasome inhibitor
trEMBLtr|A0A061ERS7|A0A061ERS7_THECC2E-59Proteasome inhibitor-related {ECO:0000313|EMBL:EOY07373.1}
TAIR10AT3G53970.24E-36proteasome inhibitor-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9607749896080429-
GWHAAZE00000003mRNA9607749896080429-
GWHAAZE00000003exon9608022896080429-
GWHAAZE00000003exon9607995796080128-
GWHAAZE00000003exon9607844996078526-
GWHAAZE00000003exon9607819996078276-
GWHAAZE00000003exon9607767996077713-
GWHAAZE00000003exon9607749896077589-
GWHAAZE00000003CDS9608022896080429-
GWHAAZE00000003CDS9607995796080128-
GWHAAZE00000003CDS9607844996078526-
GWHAAZE00000003CDS9607819996078276-
GWHAAZE00000003CDS9607767996077713-
GWHAAZE00000003CDS9607749896077589-
Transcript Sequence

Network for GWHGAAZE013060

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11566.9PI31_Prot_N241241.70E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06700PSMF1 Proteasome map03050

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.211
SRR3591706second leaf1.110
SRR3591707mature leaf0.758
SRR3591708Shoot apex0.909
SRR3591709Stem1.151
SRR3591710White floral bud9.440
SRR3591711White flower1.025
SRR3591712Green floral bud10.624
SRR3591713Yellow flower0.797
SRP173429 SRR8316895Juvenile bud stage 2.372
SRR8316896Juvenile bud stage 3.557
SRR8316897Juvenile bud stage 2.391
SRR8316894Third green stage 1.630
SRR8316900Third green stage 5.702
SRR8316901Third green stage 5.494
SRR8316898Complete white stage 1.987
SRR8316899Complete white stage 2.155
SRR8316903Complete white stage 2.641
SRR8316902Silver flowering stage1.732
SRR8316904Silver flowering stage3.410
SRR8316905Silver flowering stage0.704
SRR8316906Gold flowering stage 5.008
SRR8316907Gold flowering stage 5.737
SRR8316908Gold flowering stage 1.909
SRP132670SRR6706286Control4.218
SRR6706287Light intensity 50%4.161
SRR6706288Light intensity 20%4.627
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.515
CNS0095593Slightly white alabastrum(diploid) 22.655
CNS0095594Slightly white alabastrum(diploid) 32.834
CNS0095595Whole white alabastrum(diploid) 28.628
CNS0095596Whole white alabastrum(diploid) 39.035
CNS0095597Whole white alabastrum(diploid) 413.032
CNS0095598Silvery flower (diploied) 10.835
CNS0095599Silvery flower (diploied) 21.638
CNS0095600Silvery flower (diploied) 30.903
CNS0095601Golden flower (diploid) 10.558
CNS0095602Golden flower (diploid) 20.255
CNS0095603Golden flower (diploid) 30.442
CNS0095604Slightly white alabastrum(tetraploid) 15.660
CNS0095605Slightly white alabastrum(tetraploid) 24.937
CNS0095606Slightly white alabastrum(tetraploid) 30.249
CNS0095607Whole white alabastrum(tetraploid) 117.603
CNS0095608Whole white alabastrum(tetraploid) 222.672
CNS0095609Whole white alabastrum(tetraploid) 313.191
CNS0095610Silvery flower (tetraploid) 10.124
CNS0095611Silvery flower (tetraploid) 21.142
CNS0095612Silvery flower (tetraploid) 31.265
CNS0095613Golden flower (tetraploid) 10.290
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.892
CRA001975CRR073297Stem 11.501
CRR073298Stem 21.026
CRR073299Stem 30.504
CRR073300Leaf 13.802
CRR073301Leaf 22.678
CRR073302Leaf 32.851
CRR073303Juvenile bud 14.316
CRR073304Juvenile bud 26.294
CRR073305Juvenile bud 31.154
CRR073306Third green 15.099
CRR073307Third green 23.754
CRR073308Third green 32.053
CRR073309Second white 12.274
CRR073310Second white 25.147
CRR073311Second white 37.960
CRR073312Silver flowering 18.824
CRR073313Silver flowering 23.599
CRR073314Silver flowering 38.606
CRR073315Gold flowering 10.504
CRR073316Gold flowering 20.340
CRR073317Gold flowering 30.233
CRR073318Tawny withering 10.965
CRR073319Tawny withering 20.743
CRR073320Tawny withering 30.606