Detail information of GWHGAAZE013164


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009797650.11.6956E-173PREDICTED: uncharacterized protein LOC104244049 [Nicotiana sylvestris]
Swissprottr|Q9M3G7|ATM_ARATH0.000000002Serine/threonine-protein kinase ATM
trEMBLtr|F6HQZ0|F6HQZ0_VITVI2E-168Putative uncharacterized protein {ECO:0000313|EMBL:CCB57039.1}
TAIR10AT5G02950.11E-82Tudor/PWWP/MBT superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9791656597918841+
GWHAAZE00000003mRNA9791656597918841+
GWHAAZE00000003exon9791656597918841+
GWHAAZE00000003CDS9791656597918841+
Transcript Sequence

Network for GWHGAAZE013164

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0220


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00855.18PWWP1732584.70E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.798
SRR3591706second leaf1.685
SRR3591707mature leaf2.149
SRR3591708Shoot apex4.845
SRR3591709Stem4.894
SRR3591710White floral bud5.167
SRR3591711White flower4.877
SRR3591712Green floral bud6.485
SRR3591713Yellow flower4.272
SRP173429 SRR8316895Juvenile bud stage 6.343
SRR8316896Juvenile bud stage 10.623
SRR8316897Juvenile bud stage 3.980
SRR8316894Third green stage 3.733
SRR8316900Third green stage 12.258
SRR8316901Third green stage 11.394
SRR8316898Complete white stage 3.239
SRR8316899Complete white stage 12.349
SRR8316903Complete white stage 6.744
SRR8316902Silver flowering stage3.083
SRR8316904Silver flowering stage4.055
SRR8316905Silver flowering stage1.648
SRR8316906Gold flowering stage 4.743
SRR8316907Gold flowering stage 5.180
SRR8316908Gold flowering stage 3.989
SRP132670SRR6706286Control7.050
SRR6706287Light intensity 50%7.742
SRR6706288Light intensity 20%7.869
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.201
CNS0095593Slightly white alabastrum(diploid) 25.516
CNS0095594Slightly white alabastrum(diploid) 37.133
CNS0095595Whole white alabastrum(diploid) 27.275
CNS0095596Whole white alabastrum(diploid) 37.178
CNS0095597Whole white alabastrum(diploid) 46.386
CNS0095598Silvery flower (diploied) 16.706
CNS0095599Silvery flower (diploied) 25.155
CNS0095600Silvery flower (diploied) 38.361
CNS0095601Golden flower (diploid) 15.390
CNS0095602Golden flower (diploid) 29.099
CNS0095603Golden flower (diploid) 39.455
CNS0095604Slightly white alabastrum(tetraploid) 111.480
CNS0095605Slightly white alabastrum(tetraploid) 29.472
CNS0095606Slightly white alabastrum(tetraploid) 315.656
CNS0095607Whole white alabastrum(tetraploid) 18.716
CNS0095608Whole white alabastrum(tetraploid) 27.335
CNS0095609Whole white alabastrum(tetraploid) 310.071
CNS0095610Silvery flower (tetraploid) 18.676
CNS0095611Silvery flower (tetraploid) 29.287
CNS0095612Silvery flower (tetraploid) 37.878
CNS0095613Golden flower (tetraploid) 14.531
CNS0095614Golden flower (tetraploid) 28.405
CNS0095615Golden flower (tetraploid) 34.341
CRA001975CRR073297Stem 18.807
CRR073298Stem 27.623
CRR073299Stem 34.787
CRR073300Leaf 19.442
CRR073301Leaf 28.035
CRR073302Leaf 36.165
CRR073303Juvenile bud 18.165
CRR073304Juvenile bud 25.551
CRR073305Juvenile bud 36.469
CRR073306Third green 12.332
CRR073307Third green 21.451
CRR073308Third green 32.489
CRR073309Second white 12.490
CRR073310Second white 22.708
CRR073311Second white 32.344
CRR073312Silver flowering 11.919
CRR073313Silver flowering 21.761
CRR073314Silver flowering 32.241
CRR073315Gold flowering 11.969
CRR073316Gold flowering 22.616
CRR073317Gold flowering 30.908
CRR073318Tawny withering 13.542
CRR073319Tawny withering 22.387
CRR073320Tawny withering 33.855