Detail information of GWHGAAZE013251


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAJB84623.10carotene epsilon-monooxygenase [Camellia sinensis]
Swissprottr|Q6TBX7|LUT1_ARATH0Carotene epsilon-monooxygenase, chloroplastic (Precursor)
trEMBLtr|F6HKE4|F6HKE4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB55366.1}
TAIR10AT3G53130.10Cytochrome P450 superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9948242199489205-
GWHAAZE00000003mRNA9948242199489205-
GWHAAZE00000003exon9948871199489205-
GWHAAZE00000003exon9948790799488207-
GWHAAZE00000003exon9948667099486734-
GWHAAZE00000003exon9948565799485854-
GWHAAZE00000003exon9948524899485349-
GWHAAZE00000003exon9948483599484975-
GWHAAZE00000003exon9948463499484741-
GWHAAZE00000003exon9948396599484047-
GWHAAZE00000003exon9948333799483499-
GWHAAZE00000003exon9948242199482698-
GWHAAZE00000003CDS9948871199489205-
GWHAAZE00000003CDS9948790799488207-
GWHAAZE00000003CDS9948667099486734-
GWHAAZE00000003CDS9948565799485854-
GWHAAZE00000003CDS9948524899485349-
GWHAAZE00000003CDS9948483599484975-
GWHAAZE00000003CDS9948463499484741-
GWHAAZE00000003CDS9948396599484047-
GWHAAZE00000003CDS9948333799483499-
GWHAAZE00000003CDS9948263099482698-
GWHAAZE00000003three_prime_UTR9948242199482629-
Transcript Sequence

Network for GWHGAAZE013251

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.23p4501005445.70E-80
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09837LUT1, CYP97C1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carotenoid biosynthesismap00906

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.353
SRR3591706second leaf29.761
SRR3591707mature leaf19.135
SRR3591708Shoot apex24.063
SRR3591709Stem12.175
SRR3591710White floral bud24.928
SRR3591711White flower24.203
SRR3591712Green floral bud20.666
SRR3591713Yellow flower18.228
SRP173429 SRR8316895Juvenile bud stage 18.270
SRR8316896Juvenile bud stage 21.925
SRR8316897Juvenile bud stage 11.769
SRR8316894Third green stage 10.831
SRR8316900Third green stage 33.388
SRR8316901Third green stage 26.013
SRR8316898Complete white stage 10.504
SRR8316899Complete white stage 29.463
SRR8316903Complete white stage 17.189
SRR8316902Silver flowering stage15.422
SRR8316904Silver flowering stage21.610
SRR8316905Silver flowering stage11.237
SRR8316906Gold flowering stage 37.906
SRR8316907Gold flowering stage 36.649
SRR8316908Gold flowering stage 39.262
SRP132670SRR6706286Control24.786
SRR6706287Light intensity 50%24.742
SRR6706288Light intensity 20%26.509
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.553
CNS0095593Slightly white alabastrum(diploid) 215.007
CNS0095594Slightly white alabastrum(diploid) 310.981
CNS0095595Whole white alabastrum(diploid) 213.487
CNS0095596Whole white alabastrum(diploid) 314.515
CNS0095597Whole white alabastrum(diploid) 412.345
CNS0095598Silvery flower (diploied) 115.532
CNS0095599Silvery flower (diploied) 211.576
CNS0095600Silvery flower (diploied) 321.684
CNS0095601Golden flower (diploid) 111.825
CNS0095602Golden flower (diploid) 220.249
CNS0095603Golden flower (diploid) 318.892
CNS0095604Slightly white alabastrum(tetraploid) 116.166
CNS0095605Slightly white alabastrum(tetraploid) 214.931
CNS0095606Slightly white alabastrum(tetraploid) 325.556
CNS0095607Whole white alabastrum(tetraploid) 18.086
CNS0095608Whole white alabastrum(tetraploid) 29.852
CNS0095609Whole white alabastrum(tetraploid) 323.822
CNS0095610Silvery flower (tetraploid) 118.225
CNS0095611Silvery flower (tetraploid) 223.172
CNS0095612Silvery flower (tetraploid) 325.646
CNS0095613Golden flower (tetraploid) 111.016
CNS0095614Golden flower (tetraploid) 217.310
CNS0095615Golden flower (tetraploid) 311.779
CRA001975CRR073297Stem 125.074
CRR073298Stem 221.722
CRR073299Stem 323.928
CRR073300Leaf 127.617
CRR073301Leaf 223.827
CRR073302Leaf 326.210
CRR073303Juvenile bud 127.042
CRR073304Juvenile bud 221.528
CRR073305Juvenile bud 327.279
CRR073306Third green 126.136
CRR073307Third green 215.899
CRR073308Third green 320.850
CRR073309Second white 124.507
CRR073310Second white 228.980
CRR073311Second white 331.096
CRR073312Silver flowering 129.254
CRR073313Silver flowering 226.021
CRR073314Silver flowering 330.923
CRR073315Gold flowering 136.422
CRR073316Gold flowering 246.136
CRR073317Gold flowering 329.779
CRR073318Tawny withering 110.788
CRR073319Tawny withering 25.760
CRR073320Tawny withering 39.984