Gene detail

Detail information of GWHGAAZE013309

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AHX24367.1	0	CYP76A26-like protein [Rauvolfia serpentina]
Swissprot	tr\|P37122\|C76A2_SOLME	0	Cytochrome P450 76A2
trEMBL	tr\|A0A023PKA8\|A0A023PKA8_RAUSE	0	CYP76A26-like protein {ECO:0000313\|EMBL:AHX24367.1}
TAIR10	AT3G52970.1	2E-113	cytochrome P450, family 76, subfamily G, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	100468285	100470180	+
GWHAAZE00000003	mRNA	100468285	100470180	+
GWHAAZE00000003	exon	100468285	100468761	+
GWHAAZE00000003	exon	100468905	100469357	+
GWHAAZE00000003	exon	100469563	100470180	+
GWHAAZE00000003	CDS	100468285	100468761	+
GWHAAZE00000003	CDS	100468905	100469357	+
GWHAAZE00000003	CDS	100469563	100470180	+

Transcript Sequence
>GWHTAAZE013323 ATGGAGTTAAATTTCAGTTCAATCAACCCTTTAACCATATTCCTATCAGCTATCTTCCTCCTCCTCCTCACCCTATTAAGACCGCACTCTGCGAATAGCAAAAAAAGGCCACCTGGTCCACCAGGATGGCCGGTTTTTGGCAACATGTTTGAGCTAGGCGACCTCCCACACCAAACCATGTACAAACTCCGTTCAAAGTATGGGCCAGTCATTTGGCTCAGGCTTGGCTCGGTTAATACGATGGTGGTCCAATCAGCGGCGGCTGCAGCTGAACTGTTTAAAAGGCATGATGTTCCGTTTGCAGACCGGAAAGTTCCGGATGCACTAACAGCGTTCGATTTTCATGCAGGGTCCCTCGGGATGAACACCTATGGTGGCCATTGGCGGGTGCTCCGACGGTTGTGTTCGGTGGAGTTTTTAGTTAATAAGAGGATGAATGAGACAACGGAGCTTCGGCGGAGGATTTTGGACAACATGGTCTCATGGATTGAGGAGGAATCCACGGCTTCACGGCTAAAAGGCGGCTCAGGGGAGGTCCAGTTGAGCCAATTCTTATTCCTAATGGCATTCAATTTAGTTGGCAATTTAATGCTGTCTAGAGATTTAATGGATGCCAAAAATCCAGAAGGGAGAGAGTTTTTTGAGTCGATGAATAAGGTGTTGGAGCTGGCTGGGACCCCCAACATAGCCGATTTTTTGCCCATTTTGAAGTGGTTTGACCCTTTGAAAATAAAGAGGACCATGATTAAGGATATGTCTAGGACTATGAAGATCTCGACGAAATTCGTTCAGGAGAGACTAAAGAAAAGGGAAATGGGGCAAGAGAATAATAGTAAAAAGGATTTTTTGGATACTTTGTTGGAGTATAGAGGTGATGGTAAAGATGGCCCTGATAGCATTACTGAGAAGAATGTCAACATTGTCATTTTGGAAATGTTCTTTGCAGGTTCTGAAACTACAAGCATCAGCATCGAATGGGGTTTCACAGAACTGCTACGAAACCCCTCGGTGTTGAGTAAAGTCAGGGAAGAGATTGACAGAGTCGTTGGGCGAGACAGAAAAGTCGAAGAGAGTGACATGGACAACCTCCCTTACCTCCAGGCCGTGGTCAAAGAAACCTTGCGTTTACACCCAGCACTCCCCCTGCTACTCCCACGCAACACGATGGAAGACACAAACTATATGGGCTATCTCATCCCCAAAGATACCCAAGTCTTTGTCAACGCTTGGGCAATCGGAAGGGATCCAGATTCTTGGGAAGACCCTTTGACTTTCAAGCCAGAAAGATTCTTGAACTCAAGCATCGAGTATAAAGGTCAGCATTTTGAGTTGATTCCATTCGGTTCTGGTCGAAGAATTTGTATTGGTTTTCCATTGGCTCATAGAGTGGTGCACCTAACCCTAGCCACCCTAGCACAATCTTTTGATTGGGAGTTTCCAAGTGGTATGAACCCAAAGAGTTTGGACATGGAGGAGAGGTTGGGTTTGACTTTGAGAAAGAAGAATCCTGTTAAAATAATACCCAAAAGGAGACTTCACGTGAAGTAG

Network for GWHGAAZE013309

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0264

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	37	501	2.20E-114

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	15.399
	SRR3591706	second leaf	269.443
	SRR3591707	mature leaf	52.066
	SRR3591708	Shoot apex	122.134
	SRR3591709	Stem	1.047
	SRR3591710	White floral bud	5.624
	SRR3591711	White flower	1.367
	SRR3591712	Green floral bud	29.467
	SRR3591713	Yellow flower	0.122
SRP173429	SRR8316895	Juvenile bud stage	29.687
	SRR8316896	Juvenile bud stage	13.337
	SRR8316897	Juvenile bud stage	9.082
	SRR8316894	Third green stage	3.601
	SRR8316900	Third green stage	1.046
	SRR8316901	Third green stage	1.723
	SRR8316898	Complete white stage	0.211
	SRR8316899	Complete white stage	8.189
	SRR8316903	Complete white stage	1.320
	SRR8316902	Silver flowering stage	0.386
	SRR8316904	Silver flowering stage	0.350
	SRR8316905	Silver flowering stage	0.373
	SRR8316906	Gold flowering stage	0.618
	SRR8316907	Gold flowering stage	1.397
	SRR8316908	Gold flowering stage	1.846
SRP132670	SRR6706286	Control	7.469
	SRR6706287	Light intensity 50%	4.461
	SRR6706288	Light intensity 20%	6.030
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	29.335
	CNS0095593	Slightly white alabastrum(diploid) 2	32.971
	CNS0095594	Slightly white alabastrum(diploid) 3	50.078
	CNS0095595	Whole white alabastrum(diploid) 2	101.723
	CNS0095596	Whole white alabastrum(diploid) 3	1.205
	CNS0095597	Whole white alabastrum(diploid) 4	63.606
	CNS0095598	Silvery flower (diploied) 1	6.721
	CNS0095599	Silvery flower (diploied) 2	6.479
	CNS0095600	Silvery flower (diploied) 3	0.652
	CNS0095601	Golden flower (diploid) 1	0.065
	CNS0095602	Golden flower (diploid) 2	0.271
	CNS0095603	Golden flower (diploid) 3	0.089
	CNS0095604	Slightly white alabastrum(tetraploid) 1	17.743
	CNS0095605	Slightly white alabastrum(tetraploid) 2	31.410
	CNS0095606	Slightly white alabastrum(tetraploid) 3	110.585
	CNS0095607	Whole white alabastrum(tetraploid) 1	27.183
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.894
	CNS0095609	Whole white alabastrum(tetraploid) 3	4.079
	CNS0095610	Silvery flower (tetraploid) 1	0.334
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	1.422
	CNS0095613	Golden flower (tetraploid) 1	0.387
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.038
CRA001975	CRR073297	Stem 1	16.178
	CRR073298	Stem 2	23.615
	CRR073299	Stem 3	33.690
	CRR073300	Leaf 1	1.189
	CRR073301	Leaf 2	1.318
	CRR073302	Leaf 3	1.597
	CRR073303	Juvenile bud 1	3.379
	CRR073304	Juvenile bud 2	1.799
	CRR073305	Juvenile bud 3	1.954
	CRR073306	Third green 1	9.094
	CRR073307	Third green 2	8.212
	CRR073308	Third green 3	8.421
	CRR073309	Second white 1	25.004
	CRR073310	Second white 2	18.670
	CRR073311	Second white 3	20.406
	CRR073312	Silver flowering 1	25.730
	CRR073313	Silver flowering 2	14.179
	CRR073314	Silver flowering 3	12.479
	CRR073315	Gold flowering 1	21.971
	CRR073316	Gold flowering 2	33.186
	CRR073317	Gold flowering 3	55.487
	CRR073318	Tawny withering 1	95.872
	CRR073319	Tawny withering 2	79.743
	CRR073320	Tawny withering 3	171.009