Detail information of GWHGAAZE013325


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007203994.10hypothetical protein PRUPE_ppa000936mg [Prunus persica]
Swissprottr|Q3Y8L7|DAW1_CHLRE7E-24Dynein assembly factor with WDR repeat domains 1
trEMBLtr|M5W7F6|M5W7F6_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ05193.1}
TAIR10AT3G21540.10transducin family protein / WD-40 repeat family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene100803355100811112-
GWHAAZE00000003mRNA100803355100811112-
GWHAAZE00000003exon100803355100803378-
GWHAAZE00000003exon100803537100803587-
GWHAAZE00000003exon100803955100804077-
GWHAAZE00000003exon100804544100804612-
GWHAAZE00000003exon100804800100804928-
GWHAAZE00000003exon100805663100805872-
GWHAAZE00000003exon100807114100807345-
GWHAAZE00000003exon100807441100807622-
GWHAAZE00000003exon100808692100808814-
GWHAAZE00000003exon100809627100810706-
GWHAAZE00000003exon100810795100811010-
GWHAAZE00000003exon100811107100811112-
GWHAAZE00000003CDS100811107100811112-
GWHAAZE00000003CDS100810795100811010-
GWHAAZE00000003CDS100809627100810706-
GWHAAZE00000003CDS100808692100808814-
GWHAAZE00000003CDS100807441100807622-
GWHAAZE00000003CDS100807114100807345-
GWHAAZE00000003CDS100805663100805872-
GWHAAZE00000003CDS100804800100804928-
GWHAAZE00000003CDS100804544100804612-
GWHAAZE00000003CDS100803955100804077-
GWHAAZE00000003CDS100803537100803587-
GWHAAZE00000003CDS100803355100803378-
Transcript Sequence

Network for GWHGAAZE013325

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD4020580.00027
PF00400.33WD40661000.00021
PF00400.33WD401051411.70E-05
PF00400.33WD403113430.018
PF00400.33WD403874240.0028
PF00400.33WD404865195.90E-06
PF00400.33WD405676041.00E-06
PF04003.13Utp127078072.60E-19
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
K14556DIP2, UTP12, WDR3 Ribosome biogenesis in eukaryotes map03008

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.060
SRR3591706second leaf6.802
SRR3591707mature leaf6.439
SRR3591708Shoot apex15.854
SRR3591709Stem8.221
SRR3591710White floral bud9.523
SRR3591711White flower16.875
SRR3591712Green floral bud12.134
SRR3591713Yellow flower8.424
SRP173429 SRR8316895Juvenile bud stage 11.393
SRR8316896Juvenile bud stage 13.030
SRR8316897Juvenile bud stage 6.527
SRR8316894Third green stage 5.235
SRR8316900Third green stage 16.997
SRR8316901Third green stage 14.125
SRR8316898Complete white stage 2.765
SRR8316899Complete white stage 13.287
SRR8316903Complete white stage 4.231
SRR8316902Silver flowering stage4.481
SRR8316904Silver flowering stage6.658
SRR8316905Silver flowering stage1.944
SRR8316906Gold flowering stage 8.487
SRR8316907Gold flowering stage 7.080
SRR8316908Gold flowering stage 11.264
SRP132670SRR6706286Control6.257
SRR6706287Light intensity 50%6.792
SRR6706288Light intensity 20%7.574
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.609
CNS0095593Slightly white alabastrum(diploid) 210.216
CNS0095594Slightly white alabastrum(diploid) 37.004
CNS0095595Whole white alabastrum(diploid) 27.155
CNS0095596Whole white alabastrum(diploid) 38.502
CNS0095597Whole white alabastrum(diploid) 45.707
CNS0095598Silvery flower (diploied) 17.824
CNS0095599Silvery flower (diploied) 28.025
CNS0095600Silvery flower (diploied) 39.270
CNS0095601Golden flower (diploid) 17.747
CNS0095602Golden flower (diploid) 210.566
CNS0095603Golden flower (diploid) 39.167
CNS0095604Slightly white alabastrum(tetraploid) 111.056
CNS0095605Slightly white alabastrum(tetraploid) 27.171
CNS0095606Slightly white alabastrum(tetraploid) 323.178
CNS0095607Whole white alabastrum(tetraploid) 15.385
CNS0095608Whole white alabastrum(tetraploid) 24.599
CNS0095609Whole white alabastrum(tetraploid) 315.134
CNS0095610Silvery flower (tetraploid) 111.760
CNS0095611Silvery flower (tetraploid) 210.392
CNS0095612Silvery flower (tetraploid) 36.990
CNS0095613Golden flower (tetraploid) 13.579
CNS0095614Golden flower (tetraploid) 27.661
CNS0095615Golden flower (tetraploid) 34.207
CRA001975CRR073297Stem 112.082
CRR073298Stem 210.036
CRR073299Stem 38.685
CRR073300Leaf 110.316
CRR073301Leaf 28.144
CRR073302Leaf 38.065
CRR073303Juvenile bud 110.231
CRR073304Juvenile bud 24.343
CRR073305Juvenile bud 39.382
CRR073306Third green 10.564
CRR073307Third green 20.951
CRR073308Third green 30.789
CRR073309Second white 13.181
CRR073310Second white 23.186
CRR073311Second white 34.017
CRR073312Silver flowering 11.603
CRR073313Silver flowering 22.187
CRR073314Silver flowering 32.101
CRR073315Gold flowering 17.421
CRR073316Gold flowering 214.964
CRR073317Gold flowering 34.761
CRR073318Tawny withering 19.369
CRR073319Tawny withering 210.986
CRR073320Tawny withering 310.150