Detail information of GWHGAAZE013326


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004494088.12.22457E-33PREDICTED: WD repeat-containing protein 3-like [Cicer arietinum]
trEMBLtr|A5BV00|A5BV00_VITVI9E-34Putative uncharacterized protein {ECO:0000313|EMBL:CAN63880.1}
TAIR10AT3G21540.13E-21transducin family protein / WD-40 repeat family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene100812710100812964-
GWHAAZE00000003mRNA100812710100812964-
GWHAAZE00000003exon100812710100812964-
GWHAAZE00000003CDS100812710100812964-
Transcript Sequence

Network for GWHGAAZE013326

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14556DIP2, UTP12, WDR3 Ribosome biogenesis in eukaryotes map03008

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.853
SRR3591706second leaf7.961
SRR3591707mature leaf5.808
SRR3591708Shoot apex14.772
SRR3591709Stem6.476
SRR3591710White floral bud11.537
SRR3591711White flower15.187
SRR3591712Green floral bud11.005
SRR3591713Yellow flower10.001
SRP173429 SRR8316895Juvenile bud stage 9.692
SRR8316896Juvenile bud stage 9.150
SRR8316897Juvenile bud stage 4.426
SRR8316894Third green stage 6.075
SRR8316900Third green stage 15.486
SRR8316901Third green stage 9.013
SRR8316898Complete white stage 2.354
SRR8316899Complete white stage 9.418
SRR8316903Complete white stage 4.789
SRR8316902Silver flowering stage3.948
SRR8316904Silver flowering stage4.998
SRR8316905Silver flowering stage2.667
SRR8316906Gold flowering stage 6.541
SRR8316907Gold flowering stage 8.380
SRR8316908Gold flowering stage 9.055
SRP132670SRR6706286Control17.708
SRR6706287Light intensity 50%16.980
SRR6706288Light intensity 20%16.092
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.044
CNS0095593Slightly white alabastrum(diploid) 23.928
CNS0095594Slightly white alabastrum(diploid) 34.900
CNS0095595Whole white alabastrum(diploid) 24.210
CNS0095596Whole white alabastrum(diploid) 32.343
CNS0095597Whole white alabastrum(diploid) 43.752
CNS0095598Silvery flower (diploied) 16.196
CNS0095599Silvery flower (diploied) 210.432
CNS0095600Silvery flower (diploied) 39.776
CNS0095601Golden flower (diploid) 13.806
CNS0095602Golden flower (diploid) 29.699
CNS0095603Golden flower (diploid) 39.907
CNS0095604Slightly white alabastrum(tetraploid) 16.393
CNS0095605Slightly white alabastrum(tetraploid) 23.098
CNS0095606Slightly white alabastrum(tetraploid) 319.827
CNS0095607Whole white alabastrum(tetraploid) 12.827
CNS0095608Whole white alabastrum(tetraploid) 22.748
CNS0095609Whole white alabastrum(tetraploid) 313.438
CNS0095610Silvery flower (tetraploid) 119.425
CNS0095611Silvery flower (tetraploid) 29.983
CNS0095612Silvery flower (tetraploid) 37.315
CNS0095613Golden flower (tetraploid) 14.294
CNS0095614Golden flower (tetraploid) 28.776
CNS0095615Golden flower (tetraploid) 36.664
CRA001975CRR073297Stem 113.856
CRR073298Stem 211.525
CRR073299Stem 38.035
CRR073300Leaf 112.722
CRR073301Leaf 212.375
CRR073302Leaf 311.116
CRR073303Juvenile bud 18.297
CRR073304Juvenile bud 26.261
CRR073305Juvenile bud 39.575
CRR073306Third green 10.476
CRR073307Third green 20.388
CRR073308Third green 32.023
CRR073309Second white 11.266
CRR073310Second white 23.208
CRR073311Second white 32.655
CRR073312Silver flowering 11.947
CRR073313Silver flowering 21.993
CRR073314Silver flowering 33.312
CRR073315Gold flowering 14.444
CRR073316Gold flowering 27.937
CRR073317Gold flowering 32.997
CRR073318Tawny withering 15.522
CRR073319Tawny withering 20.768
CRR073320Tawny withering 33.997