Detail information of GWHGAAZE013436


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002267463.20PREDICTED: heat shock protein 90-1 [Vitis vinifera]
Swissprottr|P51819|HSP83_IPONI2E-115Heat shock protein 83
trEMBLtr|F6HGF1|F6HGF1_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB51152.1}
TAIR10AT2G04030.10Chaperone protein htpG family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene102637846102645038-
GWHAAZE00000003mRNA102637846102645038-
GWHAAZE00000003exon102637846102637910-
GWHAAZE00000003exon102637994102638096-
GWHAAZE00000003exon102638210102638464-
GWHAAZE00000003exon102639070102639147-
GWHAAZE00000003exon102639316102639375-
GWHAAZE00000003exon102639490102639630-
GWHAAZE00000003exon102639711102639815-
GWHAAZE00000003exon102639930102640010-
GWHAAZE00000003exon102640098102640142-
GWHAAZE00000003exon102640396102640512-
GWHAAZE00000003exon102640978102641061-
GWHAAZE00000003exon102641182102641275-
GWHAAZE00000003exon102641358102641418-
GWHAAZE00000003exon102641521102641585-
GWHAAZE00000003exon102641692102641765-
GWHAAZE00000003exon102644757102645038-
GWHAAZE00000003CDS102644757102645038-
GWHAAZE00000003CDS102641692102641765-
GWHAAZE00000003CDS102641521102641585-
GWHAAZE00000003CDS102641358102641418-
GWHAAZE00000003CDS102641182102641275-
GWHAAZE00000003CDS102640978102641061-
GWHAAZE00000003CDS102640396102640512-
GWHAAZE00000003CDS102640098102640142-
GWHAAZE00000003CDS102639930102640010-
GWHAAZE00000003CDS102639711102639815-
GWHAAZE00000003CDS102639490102639630-
GWHAAZE00000003CDS102639316102639375-
GWHAAZE00000003CDS102639070102639147-
GWHAAZE00000003CDS102638210102638464-
GWHAAZE00000003CDS102637994102638096-
GWHAAZE00000003CDS102637846102637910-
Transcript Sequence

Network for GWHGAAZE013436

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00183.19HSP902245623.70E-122
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09487HSP90B, TRA1 Protein processing in endoplasmic reticulum map04141
PI3K-Akt signaling pathwaymap04151
IL-17 signaling pathwaymap04657
Estrogen signaling pathwaymap04915
Thyroid hormone synthesismap04918
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0006457biological_processprotein folding
GO:0005524molecular_functionATP binding
GO:0051082molecular_functionunfolded protein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.312
SRR3591706second leaf4.009
SRR3591707mature leaf3.203
SRR3591708Shoot apex6.051
SRR3591709Stem3.707
SRR3591710White floral bud0.930
SRR3591711White flower1.472
SRR3591712Green floral bud1.649
SRR3591713Yellow flower0.387
SRP173429 SRR8316895Juvenile bud stage 1.723
SRR8316896Juvenile bud stage 2.095
SRR8316897Juvenile bud stage 1.631
SRR8316894Third green stage 0.596
SRR8316900Third green stage 1.314
SRR8316901Third green stage 1.419
SRR8316898Complete white stage 0.012
SRR8316899Complete white stage 0.495
SRR8316903Complete white stage 0.157
SRR8316902Silver flowering stage0.277
SRR8316904Silver flowering stage0.308
SRR8316905Silver flowering stage0.201
SRR8316906Gold flowering stage 1.352
SRR8316907Gold flowering stage 0.623
SRR8316908Gold flowering stage 1.121
SRP132670SRR6706286Control0.440
SRR6706287Light intensity 50%0.382
SRR6706288Light intensity 20%0.254
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.196
CNS0095593Slightly white alabastrum(diploid) 22.338
CNS0095594Slightly white alabastrum(diploid) 33.811
CNS0095595Whole white alabastrum(diploid) 22.020
CNS0095596Whole white alabastrum(diploid) 30.555
CNS0095597Whole white alabastrum(diploid) 42.292
CNS0095598Silvery flower (diploied) 13.517
CNS0095599Silvery flower (diploied) 23.818
CNS0095600Silvery flower (diploied) 30.845
CNS0095601Golden flower (diploid) 14.153
CNS0095602Golden flower (diploid) 21.383
CNS0095603Golden flower (diploid) 31.302
CNS0095604Slightly white alabastrum(tetraploid) 12.151
CNS0095605Slightly white alabastrum(tetraploid) 22.236
CNS0095606Slightly white alabastrum(tetraploid) 33.673
CNS0095607Whole white alabastrum(tetraploid) 12.077
CNS0095608Whole white alabastrum(tetraploid) 20.520
CNS0095609Whole white alabastrum(tetraploid) 31.549
CNS0095610Silvery flower (tetraploid) 11.167
CNS0095611Silvery flower (tetraploid) 21.371
CNS0095612Silvery flower (tetraploid) 31.547
CNS0095613Golden flower (tetraploid) 10.464
CNS0095614Golden flower (tetraploid) 21.284
CNS0095615Golden flower (tetraploid) 30.270
CRA001975CRR073297Stem 10.769
CRR073298Stem 20.532
CRR073299Stem 30.000
CRR073300Leaf 10.272
CRR073301Leaf 20.145
CRR073302Leaf 30.110
CRR073303Juvenile bud 10.025
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.440
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.261
CRR073319Tawny withering 20.672
CRR073320Tawny withering 30.469