Gene detail

Detail information of GWHGAAZE013449

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009607162.1	0	PREDICTED: cytochrome P450 CYP749A22-like [Nicotiana tomentosiformis]
Swissprot	tr\|H2DH17\|C7A22_PANGI	0	Cytochrome P450 CYP749A22
trEMBL	tr\|A0A068TVZ1\|A0A068TVZ1_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_5 {ECO:0000313\|EMBL:CDP00470.1}
TAIR10	AT2G26710.1	1E-104	Cytochrome P450 superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	102793375	102795309	+
GWHAAZE00000003	mRNA	102793375	102795309	+
GWHAAZE00000003	exon	102793375	102793657	+
GWHAAZE00000003	exon	102793800	102794023	+
GWHAAZE00000003	exon	102794109	102794341	+
GWHAAZE00000003	exon	102794426	102794804	+
GWHAAZE00000003	exon	102794881	102795309	+
GWHAAZE00000003	CDS	102793375	102793657	+
GWHAAZE00000003	CDS	102793800	102794023	+
GWHAAZE00000003	CDS	102794109	102794341	+
GWHAAZE00000003	CDS	102794426	102794804	+
GWHAAZE00000003	CDS	102794881	102795309	+

Transcript Sequence
>GWHTAAZE013463 ATGACTCTGGTTGAAGCTCTCTTAATCTTCCTCTCAACCACTGCGAGTCTGTTCCTCTTATGGACTCTCACTAGGCTCCTTCACAAAGTATGGTGGACTCCTATTTACATACAGAAAAAGATGAGTTCACAGGGAATAAAAGGTTTGCCTTACAAATTTCCCCATGGCAACACCCAACTCATCTCCAATATGAGAAGCCAATCCATGGACAAACCCATGGAAATTTCCCACAAAATGTTCCCCAGGATTCAACCTCATGTGTACCTCTGGAACAAGATTTATGGGGCGAGTTTTATTAATTGGCATGGTGCACAAGCCGAGTTGTTTGTCACAGAACCAGAACTTATCAAAGAAATACTGAACAATAAAGAAGGTGCTTATCCTAAAATGGAGATGGTAGGGTACGCAAAGAAACTGTTAGGGGAAGCGCTTATAACAAATGAAGGTGAAAAATGGGCAAAGATAAGGAAACTCGCCAATCACACTTTCCATGCAGAAAGCTTGAAGAGTATGATACCGGAAATGAGTGCAAGCGTTGAGATAATGCTAGAAAGATGGAGACATTATGAAGGAAAGGAGATTGACGTGTTTAAAGAATTTGGGGCTTTAACAACTGAAGTGATTTCAAGAACGGCTTTTGGTAGTAGTTACTTGGATGGGAAACATATATTTGAGATGGTGTCAAAACTCACTGCCGTAACTGTTAGAAATGTGTACAATATTAGGTTTCCCGGAATCAGTCGAATATTTAAAAATGGTGACGAGATTGAAGCGGAAAAACTTGAACAAGGAATCAAGAAATCAATTCTAGATTTTGTGAACAGAAGAGTTGAAGAGGCGAAGAATGGAGAAATTGACAACTATGGAAGTGATTATCTTGGACAACTTGTGGAAATTGGACATCACTCGGATAAGGACAAGAGGATTACTCTGGAACAAATGGTTGATGAGATCAAGGCCTTGTATGGCGCTGGGCATTTAACAACTACAAACTTACTCGCTTGGAGTATTTTCCTTCTTGCAATACATACAGATTGGCAAGAAAAAGCTAGGAAGGAGGTGGGCGAGTTCTTTGGCCACAAAAATCCAACTTCTGATGGTATTGCAAGGCTTAAAAATATGAACATGATCATTAACGAATCTCTAAGGCTATATCCTCCTGTGATTACTGTCACAAGGAAAGTTCAGAGGGAAGTGAGATTGGGGAACTTCATTCTACCCGCTAATATAAATGTTTTCATTTCAATACTTGCACTTCATCACAATCCTCAAATTTGGGGAGAAGATGTTCACCTTTTTAAACCAGAGAGGTTTGCTGAAGGGGTGGCCAAAGCTACGAAAAATAATGCCGCTGCATTTGTCCCATTCGGTATGGGGCCCAGAACTTGTGTGGGTTTGAACTTTACAACCAATGAAGCGAAGATTGCGCTTTCAATGATTCTTCAACGTTACAAGTTCACTTTGTCTCCAAATTATGAACACTACCCAGCCGATATCTTTATTCTTACACCCAAAAGCGGAGTTCAAGTCATCCTGCAAAAAATTTGA

Network for GWHGAAZE013449

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	91	510	5.00E-76

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15639	CYP734A1, BAS1	Brassinosteroid biosynthesis	map00905

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.594
	SRR3591710	White floral bud	0.088
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.369
SRP173429	SRR8316895	Juvenile bud stage	0.022
	SRR8316896	Juvenile bud stage	0.230
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.055
	SRR8316900	Third green stage	0.341
	SRR8316901	Third green stage	0.142
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.713
	SRR8316903	Complete white stage	0.034
	SRR8316902	Silver flowering stage	0.163
	SRR8316904	Silver flowering stage	0.038
	SRR8316905	Silver flowering stage	0.051
	SRR8316906	Gold flowering stage	0.109
	SRR8316907	Gold flowering stage	0.180
	SRR8316908	Gold flowering stage	0.182
SRP132670	SRR6706286	Control	0.149
	SRR6706287	Light intensity 50%	0.218
	SRR6706288	Light intensity 20%	0.176
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.057
	CNS0095593	Slightly white alabastrum(diploid) 2	0.337
	CNS0095594	Slightly white alabastrum(diploid) 3	0.346
	CNS0095595	Whole white alabastrum(diploid) 2	0.199
	CNS0095596	Whole white alabastrum(diploid) 3	0.046
	CNS0095597	Whole white alabastrum(diploid) 4	0.190
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.315
	CNS0095601	Golden flower (diploid) 1	0.065
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.186
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.149
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.401
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.344
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.105
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.158
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.042
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.031
	CNS0095612	Silvery flower (tetraploid) 3	0.081
	CNS0095613	Golden flower (tetraploid) 1	0.039
	CNS0095614	Golden flower (tetraploid) 2	0.379
	CNS0095615	Golden flower (tetraploid) 3	0.204
CRA001975	CRR073297	Stem 1	0.089
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.211
	CRR073300	Leaf 1	0.101
	CRR073301	Leaf 2	0.214
	CRR073302	Leaf 3	0.062
	CRR073303	Juvenile bud 1	0.286
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.188
	CRR073306	Third green 1	0.021
	CRR073307	Third green 2	0.081
	CRR073308	Third green 3	0.042
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.017
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.038
	CRR073316	Gold flowering 2	0.032
	CRR073317	Gold flowering 3	0.029
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.057
	CRR073320	Tawny withering 3	0.000