Detail information of GWHGAAZE013503


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011017607.10PREDICTED: uncharacterized protein LOC105120899 [Populus euphratica]
Swissprottr|Q9ZUM9|ASHR2_ARATH0.000000002Histone-lysine N-methyltransferase ASHR2
trEMBLtr|F6H7J2|F6H7J2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB48153.1}
TAIR10AT1G26760.15E-171SET domain protein 35

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene103534051103535646+
GWHAAZE00000003mRNA103534051103535646+
GWHAAZE00000003exon103534051103535646+
GWHAAZE00000003CDS103534051103535646+
Transcript Sequence

Network for GWHGAAZE013503

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00856.29SET1853573.60E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilySET

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.759
SRR3591706second leaf0.997
SRR3591707mature leaf0.079
SRR3591708Shoot apex7.939
SRR3591709Stem1.347
SRR3591710White floral bud0.256
SRR3591711White flower0.222
SRR3591712Green floral bud0.583
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.847
SRR8316896Juvenile bud stage 1.232
SRR8316897Juvenile bud stage 0.335
SRR8316894Third green stage 0.536
SRR8316900Third green stage 0.437
SRR8316901Third green stage 0.595
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.313
SRR8316903Complete white stage 0.061
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.049
SRP132670SRR6706286Control0.305
SRR6706287Light intensity 50%0.456
SRR6706288Light intensity 20%0.468
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.857
CNS0095593Slightly white alabastrum(diploid) 20.302
CNS0095594Slightly white alabastrum(diploid) 30.843
CNS0095595Whole white alabastrum(diploid) 20.562
CNS0095596Whole white alabastrum(diploid) 30.299
CNS0095597Whole white alabastrum(diploid) 40.445
CNS0095598Silvery flower (diploied) 10.581
CNS0095599Silvery flower (diploied) 20.646
CNS0095600Silvery flower (diploied) 30.051
CNS0095601Golden flower (diploid) 10.073
CNS0095602Golden flower (diploid) 20.154
CNS0095603Golden flower (diploid) 30.325
CNS0095604Slightly white alabastrum(tetraploid) 11.115
CNS0095605Slightly white alabastrum(tetraploid) 20.380
CNS0095606Slightly white alabastrum(tetraploid) 31.023
CNS0095607Whole white alabastrum(tetraploid) 10.505
CNS0095608Whole white alabastrum(tetraploid) 20.258
CNS0095609Whole white alabastrum(tetraploid) 30.206
CNS0095610Silvery flower (tetraploid) 10.167
CNS0095611Silvery flower (tetraploid) 20.040
CNS0095612Silvery flower (tetraploid) 30.032
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.183
CRR073298Stem 21.713
CRR073299Stem 31.933
CRR073300Leaf 10.846
CRR073301Leaf 20.202
CRR073302Leaf 30.327
CRR073303Juvenile bud 10.054
CRR073304Juvenile bud 20.160
CRR073305Juvenile bud 30.477
CRR073306Third green 10.000
CRR073307Third green 20.024
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.033
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.724
CRR073318Tawny withering 12.701
CRR073319Tawny withering 22.143
CRR073320Tawny withering 33.544