Gene detail

Detail information of GWHGAAZE013504

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_008389448.1	PREDICTED: cytochrome P450 704B1 [Malus domestica]
Swissprot	tr\|Q9C788\|C70B1_ARATH	Cytochrome P450 704B1
trEMBL	tr\|W9RQK2\|W9RQK2_9ROSA	Cytochrome P450 704C1 {ECO:0000313\|EMBL:EXB92426.1}
TAIR10	AT1G69500.1	cytochrome P450, family 704, subfamily B, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	103536712	103538992	+
GWHAAZE00000003	mRNA	103536712	103538992	+
GWHAAZE00000003	exon	103536712	103536897	+
GWHAAZE00000003	exon	103537163	103537405	+
GWHAAZE00000003	exon	103537515	103537751	+
GWHAAZE00000003	exon	103537911	103538297	+
GWHAAZE00000003	exon	103538375	103538559	+
GWHAAZE00000003	exon	103538776	103538992	+
GWHAAZE00000003	CDS	103536712	103536897	+
GWHAAZE00000003	CDS	103537163	103537405	+
GWHAAZE00000003	CDS	103537515	103537751	+
GWHAAZE00000003	CDS	103537911	103538297	+
GWHAAZE00000003	CDS	103538375	103538559	+
GWHAAZE00000003	CDS	103538776	103538992	+

Transcript Sequence
>GWHTAAZE013518 TGGAACCAGAGGGACATCAAAGGCCCTAAGACATGGCCACTCGTAGGTGCAGCAATCGAACAACTGGTGAATTATGACTGTATGCACGACTGGCTCGTCAAGTACCTGGCTGAGTCAAGAAGTGTAGTTGTCCCAATGCCCTTCACTACATATACTTACATTGCTGATCCTGCTAGTGTAGAACATTCTTTTCTTTTCTATTGTTTGTTAAAGGGTGATGTATATCATTCGTATATGGAAGTGCTACTTGGAGATGGGATCTTTAATGTAGATGGCGACCTTTGGAGGCAACAAAGGAAGACTGCAAGTTTTGAGTTTGCTTCCAAGAACTTGAGGGATTTTAGCACTGTAGTTTTCAGGGATTTTAGCCTTAAACTCTCTGCCATCCTAAGTCAAGCATCTTCACAGAATACGCAAGTAGACATGCAGGAATTGTTGATGAGGATGACTTTGGACTCCATCTGTAAGGTAGGATTTGGGGTGGAAATAGGAACATTGGCTCCCCATCTACCAGAGAATCGCTTTGCCCAAGCATTTGACACTGCAAACATTGTTGTCACTCTTCGGTTCATCGACCCTCTATGGAAAATAAAGAGATTCCTCAATGCGGGTTCAGAAGCCGTTCTTGACAAGAGCATTAAAGCGATCGATGATTTTACATACTCGATTAAGCATGATATATTGTCGAGATTCATTGAGCTAGGCAAAGAGCCCGGAAGCAATATAAACGACAAGAGCCTCAGAGATATTGTACTCAACTTTGTGATTGCTGGCCGAGACACCACGGCCACAACTCTATCATGGGCTATATATATGGTAATGACCCACGATCATGTAGCGGAAAAGCTATACTCAGAGCTTAAAGATTTTGAACAAGAACACGCAAAAGAAGAGAATGTCAACTTGCATTCTTATGATCATGAGTACCCCGCATCTTTGAATCAGAGAGCAAAGCAATTTGCAGGACTTTTGAGTTATGATTCATTAAGTAAATTGTATTACTTGCACGCAGTAATCACAGAAACACTGCGATTGTACCCTGCCGTTCCTCAGGATCCGAAGGGTATTTTGCAGAATGATGTTTTACCCGATGGGACTAAAGTGAAAGCAGGAGGTATGGTGACTTATGTGCCTTACTCGATGGGTAGGATGGAGTATAACTGGGGTCCCGATGCAGCTTCATTCAAGCCCGAGAGATGGCTCAAAGATGGAGTCTTTCAAAATGTATCTCCATTCAAGGGTATCATGGTCTTTTTCCATTTTCTTGATGAGCAGGCAGGTCCAAGGATATGCCTTGGGAAGGACTCTGCTTACCTCCAGATGAAGATGGCAATGGCCATATTGTGTAGATTTTACAAATTCAAGTTGGTGCCAGGGCATACAGTGAGGTACAGGATGATGACAATTCTGTCAATGGCACAAGGGCTAATGGTTACAGTTTCCATCCGCTCTTAA

Network for GWHGAAZE013504

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	7	475	1.90E-51

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K20495	CYP704B1	Metabolic pathways	map01100
		Fatty acid degradation	map00071
		Cutin, suberine and wax biosynthesis	map00073

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.140
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.090
	SRR3591708	Shoot apex	0.334
	SRR3591709	Stem	0.263
	SRR3591710	White floral bud	0.903
	SRR3591711	White flower	0.857
	SRR3591712	Green floral bud	0.953
	SRR3591713	Yellow flower	0.839
SRP173429	SRR8316895	Juvenile bud stage	0.190
	SRR8316896	Juvenile bud stage	0.454
	SRR8316897	Juvenile bud stage	0.085
	SRR8316894	Third green stage	0.254
	SRR8316900	Third green stage	1.042
	SRR8316901	Third green stage	1.419
	SRR8316898	Complete white stage	0.683
	SRR8316899	Complete white stage	0.662
	SRR8316903	Complete white stage	1.232
	SRR8316902	Silver flowering stage	0.392
	SRR8316904	Silver flowering stage	0.908
	SRR8316905	Silver flowering stage	0.108
	SRR8316906	Gold flowering stage	0.356
	SRR8316907	Gold flowering stage	0.194
	SRR8316908	Gold flowering stage	0.684
SRP132670	SRR6706286	Control	1.633
	SRR6706287	Light intensity 50%	1.959
	SRR6706288	Light intensity 20%	1.674
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.275
	CNS0095593	Slightly white alabastrum(diploid) 2	2.924
	CNS0095594	Slightly white alabastrum(diploid) 3	0.527
	CNS0095595	Whole white alabastrum(diploid) 2	1.116
	CNS0095596	Whole white alabastrum(diploid) 3	0.580
	CNS0095597	Whole white alabastrum(diploid) 4	0.703
	CNS0095598	Silvery flower (diploied) 1	0.279
	CNS0095599	Silvery flower (diploied) 2	1.718
	CNS0095600	Silvery flower (diploied) 3	1.391
	CNS0095601	Golden flower (diploid) 1	0.564
	CNS0095602	Golden flower (diploid) 2	0.559
	CNS0095603	Golden flower (diploid) 3	0.384
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.997
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.458
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.649
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.330
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.588
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.685
	CNS0095610	Silvery flower (tetraploid) 1	7.043
	CNS0095611	Silvery flower (tetraploid) 2	3.370
	CNS0095612	Silvery flower (tetraploid) 3	3.937
	CNS0095613	Golden flower (tetraploid) 1	0.185
	CNS0095614	Golden flower (tetraploid) 2	9.077
	CNS0095615	Golden flower (tetraploid) 3	2.784
CRA001975	CRR073297	Stem 1	0.173
	CRR073298	Stem 2	0.287
	CRR073299	Stem 3	0.046
	CRR073300	Leaf 1	2.096
	CRR073301	Leaf 2	1.624
	CRR073302	Leaf 3	1.891
	CRR073303	Juvenile bud 1	0.746
	CRR073304	Juvenile bud 2	1.553
	CRR073305	Juvenile bud 3	2.600
	CRR073306	Third green 1	0.430
	CRR073307	Third green 2	0.125
	CRR073308	Third green 3	1.083
	CRR073309	Second white 1	0.053
	CRR073310	Second white 2	0.257
	CRR073311	Second white 3	0.120
	CRR073312	Silver flowering 1	0.033
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.002
	CRR073316	Gold flowering 2	0.040
	CRR073317	Gold flowering 3	0.030
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000