Detail information of GWHGAAZE013517


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010652003.10PREDICTED: probable apyrase 6 isoform X1 [Vitis vinifera]
Swissprottr|O80612|APY6_ARATH3E-170Probable apyrase 6
trEMBLtr|F6HPR0|F6HPR0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB56541.1}
TAIR10AT2G02970.13E-134GDA1/CD39 nucleoside phosphatase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene103749707103754744+
GWHAAZE00000003mRNA103749707103754744+
GWHAAZE00000003exon103749707103749827+
GWHAAZE00000003exon103750748103751059+
GWHAAZE00000003exon103752026103752138+
GWHAAZE00000003exon103752243103752387+
GWHAAZE00000003exon103753449103753772+
GWHAAZE00000003exon103753883103753980+
GWHAAZE00000003exon103754085103754281+
GWHAAZE00000003exon103754468103754744+
GWHAAZE00000003CDS103749707103749827+
GWHAAZE00000003CDS103750748103751059+
GWHAAZE00000003CDS103752026103752138+
GWHAAZE00000003CDS103752243103752387+
GWHAAZE00000003CDS103753449103753772+
GWHAAZE00000003CDS103753883103753980+
GWHAAZE00000003CDS103754085103754281+
GWHAAZE00000003CDS103754468103754744+
Transcript Sequence

Network for GWHGAAZE013517

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01150.18GDA1_CD39604612.40E-63
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01510ENTPD1_3_8, CD39 Metabolic pathways map01100
Purine metabolismmap00230
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf21.004
SRR3591706second leaf11.525
SRR3591707mature leaf12.558
SRR3591708Shoot apex17.993
SRR3591709Stem21.301
SRR3591710White floral bud35.666
SRR3591711White flower18.652
SRR3591712Green floral bud38.048
SRR3591713Yellow flower16.920
SRP173429 SRR8316895Juvenile bud stage 9.430
SRR8316896Juvenile bud stage 15.576
SRR8316897Juvenile bud stage 8.375
SRR8316894Third green stage 7.588
SRR8316900Third green stage 29.014
SRR8316901Third green stage 24.818
SRR8316898Complete white stage 12.130
SRR8316899Complete white stage 28.726
SRR8316903Complete white stage 14.342
SRR8316902Silver flowering stage9.102
SRR8316904Silver flowering stage14.192
SRR8316905Silver flowering stage6.009
SRR8316906Gold flowering stage 17.859
SRR8316907Gold flowering stage 18.727
SRR8316908Gold flowering stage 18.917
SRP132670SRR6706286Control8.718
SRR6706287Light intensity 50%9.157
SRR6706288Light intensity 20%9.745
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.050
CNS0095593Slightly white alabastrum(diploid) 222.949
CNS0095594Slightly white alabastrum(diploid) 323.832
CNS0095595Whole white alabastrum(diploid) 241.400
CNS0095596Whole white alabastrum(diploid) 343.330
CNS0095597Whole white alabastrum(diploid) 451.873
CNS0095598Silvery flower (diploied) 111.851
CNS0095599Silvery flower (diploied) 211.239
CNS0095600Silvery flower (diploied) 320.186
CNS0095601Golden flower (diploid) 111.832
CNS0095602Golden flower (diploid) 218.441
CNS0095603Golden flower (diploid) 318.943
CNS0095604Slightly white alabastrum(tetraploid) 125.421
CNS0095605Slightly white alabastrum(tetraploid) 227.465
CNS0095606Slightly white alabastrum(tetraploid) 316.003
CNS0095607Whole white alabastrum(tetraploid) 137.961
CNS0095608Whole white alabastrum(tetraploid) 244.568
CNS0095609Whole white alabastrum(tetraploid) 328.701
CNS0095610Silvery flower (tetraploid) 115.768
CNS0095611Silvery flower (tetraploid) 216.183
CNS0095612Silvery flower (tetraploid) 315.542
CNS0095613Golden flower (tetraploid) 18.860
CNS0095614Golden flower (tetraploid) 214.317
CNS0095615Golden flower (tetraploid) 310.122
CRA001975CRR073297Stem 18.071
CRR073298Stem 28.859
CRR073299Stem 36.308
CRR073300Leaf 118.349
CRR073301Leaf 213.434
CRR073302Leaf 39.160
CRR073303Juvenile bud 114.253
CRR073304Juvenile bud 27.643
CRR073305Juvenile bud 38.503
CRR073306Third green 111.565
CRR073307Third green 210.060
CRR073308Third green 38.467
CRR073309Second white 17.678
CRR073310Second white 29.129
CRR073311Second white 36.985
CRR073312Silver flowering 16.566
CRR073313Silver flowering 27.942
CRR073314Silver flowering 35.888
CRR073315Gold flowering 14.994
CRR073316Gold flowering 27.196
CRR073317Gold flowering 34.451
CRR073318Tawny withering 111.381
CRR073319Tawny withering 211.676
CRR073320Tawny withering 312.247