Detail information of GWHGAAZE013536


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010935629.12.95012E-14PREDICTED: sucrose transport protein SUT4-like isoform X3 [Elaeis guineensis]
Swissprottr|Q6YK44|SUT4_ORYSJ7E-15Sucrose transport protein SUT4
trEMBLtr|K3YQZ9|K3YQZ9_SETIT9E-14Uncharacterized protein {ECO:0000313|EnsemblPlants:Si016693m}
TAIR10AT2G02860.13E-11sucrose transporter 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene104059833104062053+
GWHAAZE00000003mRNA104059833104062053+
GWHAAZE00000003exon104059833104059878+
GWHAAZE00000003exon104061293104061313+
GWHAAZE00000003exon104061416104061459+
GWHAAZE00000003exon104061743104062053+
GWHAAZE00000003CDS104059833104059878+
GWHAAZE00000003CDS104061293104061313+
GWHAAZE00000003CDS104061416104061459+
GWHAAZE00000003CDS104061743104061835+
GWHAAZE00000003three_prime_UTR104061836104062053+
Transcript Sequence

Network for GWHGAAZE013536

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0195


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.122
SRR3591706second leaf10.804
SRR3591707mature leaf11.430
SRR3591708Shoot apex14.047
SRR3591709Stem9.720
SRR3591710White floral bud9.503
SRR3591711White flower8.220
SRR3591712Green floral bud8.645
SRR3591713Yellow flower5.022
SRP173429 SRR8316895Juvenile bud stage 33.822
SRR8316896Juvenile bud stage 46.100
SRR8316897Juvenile bud stage 30.117
SRR8316894Third green stage 17.067
SRR8316900Third green stage 23.751
SRR8316901Third green stage 33.400
SRR8316898Complete white stage 9.271
SRR8316899Complete white stage 33.719
SRR8316903Complete white stage 19.358
SRR8316902Silver flowering stage6.462
SRR8316904Silver flowering stage9.072
SRR8316905Silver flowering stage3.061
SRR8316906Gold flowering stage 11.489
SRR8316907Gold flowering stage 13.454
SRR8316908Gold flowering stage 12.267
SRP132670SRR6706286Control13.817
SRR6706287Light intensity 50%16.444
SRR6706288Light intensity 20%15.904
CNP0000432CNS0095592Slightly white alabastrum(diploid) 172.868
CNS0095593Slightly white alabastrum(diploid) 266.382
CNS0095594Slightly white alabastrum(diploid) 362.376
CNS0095595Whole white alabastrum(diploid) 250.138
CNS0095596Whole white alabastrum(diploid) 336.540
CNS0095597Whole white alabastrum(diploid) 450.561
CNS0095598Silvery flower (diploied) 163.547
CNS0095599Silvery flower (diploied) 247.461
CNS0095600Silvery flower (diploied) 35.853
CNS0095601Golden flower (diploid) 160.786
CNS0095602Golden flower (diploid) 214.102
CNS0095603Golden flower (diploid) 312.816
CNS0095604Slightly white alabastrum(tetraploid) 152.761
CNS0095605Slightly white alabastrum(tetraploid) 240.557
CNS0095606Slightly white alabastrum(tetraploid) 340.804
CNS0095607Whole white alabastrum(tetraploid) 140.399
CNS0095608Whole white alabastrum(tetraploid) 230.247
CNS0095609Whole white alabastrum(tetraploid) 325.430
CNS0095610Silvery flower (tetraploid) 120.730
CNS0095611Silvery flower (tetraploid) 29.517
CNS0095612Silvery flower (tetraploid) 39.548
CNS0095613Golden flower (tetraploid) 111.874
CNS0095614Golden flower (tetraploid) 216.142
CNS0095615Golden flower (tetraploid) 37.940
CRA001975CRR073297Stem 117.834
CRR073298Stem 215.514
CRR073299Stem 31.822
CRR073300Leaf 116.510
CRR073301Leaf 216.175
CRR073302Leaf 30.933
CRR073303Juvenile bud 12.141
CRR073304Juvenile bud 21.064
CRR073305Juvenile bud 32.197
CRR073306Third green 10.099
CRR073307Third green 20.000
CRR073308Third green 30.111
CRR073309Second white 10.436
CRR073310Second white 20.393
CRR073311Second white 30.127
CRR073312Silver flowering 10.785
CRR073313Silver flowering 20.039
CRR073314Silver flowering 30.180
CRR073315Gold flowering 13.257
CRR073316Gold flowering 27.464
CRR073317Gold flowering 30.042
CRR073318Tawny withering 16.889
CRR073319Tawny withering 213.838
CRR073320Tawny withering 36.216