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Detail information of GWHGAAZE013584
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_010652978.1
0
PREDICTED: chaperone protein dnaJ 16 [Vitis vinifera]
Swissprot
tr|Q8VXV4|DNJ16_ARATH
0
Chaperone protein dnaJ 16
trEMBL
tr|D7TNL0|D7TNL0_VITVI
0
Putative uncharacterized protein {ECO:0000313|EMBL:CBI32083.3}
TAIR10
AT1G24120.1
5E-165
ARG1-like 1
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000003
gene
104851388
104860132
+
GWHAAZE00000003
mRNA
104851388
104860132
+
GWHAAZE00000003
exon
104851388
104851524
+
GWHAAZE00000003
exon
104852455
104852626
+
GWHAAZE00000003
exon
104852688
104852770
+
GWHAAZE00000003
exon
104852909
104853020
+
GWHAAZE00000003
exon
104853129
104853233
+
GWHAAZE00000003
exon
104853535
104853585
+
GWHAAZE00000003
exon
104859129
104859218
+
GWHAAZE00000003
exon
104859319
104859427
+
GWHAAZE00000003
exon
104859540
104859688
+
GWHAAZE00000003
exon
104859772
104859825
+
GWHAAZE00000003
exon
104859905
104860132
+
GWHAAZE00000003
CDS
104851388
104851524
+
GWHAAZE00000003
CDS
104852455
104852626
+
GWHAAZE00000003
CDS
104852688
104852770
+
GWHAAZE00000003
CDS
104852909
104853020
+
GWHAAZE00000003
CDS
104853129
104853233
+
GWHAAZE00000003
CDS
104853535
104853585
+
GWHAAZE00000003
CDS
104859129
104859218
+
GWHAAZE00000003
CDS
104859319
104859427
+
GWHAAZE00000003
CDS
104859540
104859688
+
GWHAAZE00000003
CDS
104859772
104859825
+
GWHAAZE00000003
CDS
104859905
104860132
+
Transcript Sequence
>GWHTAAZE013598 ATGGCTGGTCACCGGTCCAGATCGGAGAAGAAGGATGCGGCGAAGATGCTTCGTAGAGATCCCTATGAGGTTCTTGGAGTCTCCGGCAACTCCACGGATCAGGAAATCAAGACTGCTTATCGTAAAATGGCTTTAAAGTACCATCCTGACAAGAATGCAAATGACCCTAAAGCAGCTGATATGTTCAAAGAGGCCACATTTTCCTACAATATTTTGTCTGATCCAGATAAACGGCGCCAATATGACAGTGCTGGTTTTGAGGTTAGGATATTTCTAGGTCCAGCCATCCCATTGGTAGAATTTGATATAGCCGTTGAATCTGAAAGCCAAGAGCTGGAGCTGGATCTTTCAAGTTTGGGAGCTGTGAATACAATGTTTGCAGCACTTTTCAGTAAACTTGGTGTGCCAATTAAAACAACTGTATCTGCTACTGTATTGGAGGAGGCACTAAATGGCACAGTACCCATAACTCCACTTCCTCTTGGCAAACCTGTGTTTAGAAAAGTTGAAAAGCAATGTGCTCACTTCTATTCTGTTACAATAACAGAGAGGGAGGCACAAGCTGGATTGGTGTGCCGAGTGCAATCAGCAGACAAAAGCAAATTCAAGCTGTTGTACTTTGATCAGGAAGAAAACAGTGGATTAAGCCTTTCCCTGCAGGAGGATAGTGCAAAAACAGGAAAAGTTACATCTGCGGGGATGTATTTTCTTGGTTTCCCTGTTTATCGACTGGATCAAACATTGAACTCGGTGGCAGCTGCTAAGGATCCAGATGCTGCTTTTTTCAAAAAACTTGATGGCTTTCATCCATGCGAAGTAACTGAACTAAAAGCTGGCACCAGCGTGTTTGCGGTTTACGGTGACAATTTTTTCAAAAGTGTAAGCTACACCATAGAAGCTCTTTGTGCTGCACCTTTTACAGAAGAAAAGGAGAATCTCAGAGCTGTGGAGGCTCAAATTTTGTCAAAAAGGGTCGAAATTTCCAAGTTTGAAACTGAATACAGAGAGGTTCTAACGCAATTTACAGAAATGACGAGTAGATATGCGCAAGAAATGCAAGCGATTGATGATCTTCTTAAGCAAAGAAATGAAATACATGCATCATACACAAGTGCTCCATCAATAAAGCGAAGTAGTAGCAGTAGCAGTAGAAGCAAGAATAGGGGTGCACCCAAGGAGGCTAAAGAAGATGTTCCATTAAGGGATAAGAAGCCTTCGACGAGGGACCGGACAAAGAAGAAGAAATGGTTTAATATTCACTTAAAGGTGGACAAGAGGAAGCCTTGCTGA
Network for GWHGAAZE013584
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF00226.32
DnaJ
20
82
3.80E-25
Protein Sequence
>GWHPAAZE013591 MAGHRSRSEKKDAAKMLRRDPYEVLGVSGNSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEATFSYNILSDPDKRRQYDSAGFEVRIFLGPAIPLVEFDIAVESESQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGTVPITPLPLGKPVFRKVEKQCAHFYSVTITEREAQAGLVCRVQSADKSKFKLLYFDQEENSGLSLSLQEDSAKTGKVTSAGMYFLGFPVYRLDQTLNSVAAAKDPDAAFFKKLDGFHPCEVTELKAGTSVFAVYGDNFFKSVSYTIEALCAAPFTEEKENLRAVEAQILSKRVEISKFETEYREVLTQFTEMTSRYAQEMQAIDDLLKQRNEIHASYTSAPSIKRSSSSSSRSKNRGAPKEAKEDVPLRDKKPSTRDRTKKKKWFNIHLKVDKRKPC
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
29.353
SRR3591706
second leaf
14.768
SRR3591707
mature leaf
9.630
SRR3591708
Shoot apex
27.549
SRR3591709
Stem
57.064
SRR3591710
White floral bud
18.660
SRR3591711
White flower
22.512
SRR3591712
Green floral bud
20.896
SRR3591713
Yellow flower
22.276
SRP173429
SRR8316895
Juvenile bud stage
16.715
SRR8316896
Juvenile bud stage
19.494
SRR8316897
Juvenile bud stage
9.446
SRR8316894
Third green stage
8.697
SRR8316900
Third green stage
21.538
SRR8316901
Third green stage
22.878
SRR8316898
Complete white stage
12.128
SRR8316899
Complete white stage
31.577
SRR8316903
Complete white stage
16.843
SRR8316902
Silver flowering stage
10.807
SRR8316904
Silver flowering stage
13.710
SRR8316905
Silver flowering stage
5.820
SRR8316906
Gold flowering stage
25.109
SRR8316907
Gold flowering stage
17.140
SRR8316908
Gold flowering stage
20.587
SRP132670
SRR6706286
Control
22.011
SRR6706287
Light intensity 50%
21.351
SRR6706288
Light intensity 20%
22.893
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
17.283
CNS0095593
Slightly white alabastrum(diploid) 2
17.784
CNS0095594
Slightly white alabastrum(diploid) 3
14.066
CNS0095595
Whole white alabastrum(diploid) 2
16.584
CNS0095596
Whole white alabastrum(diploid) 3
14.857
CNS0095597
Whole white alabastrum(diploid) 4
18.022
CNS0095598
Silvery flower (diploied) 1
21.311
CNS0095599
Silvery flower (diploied) 2
15.770
CNS0095600
Silvery flower (diploied) 3
24.358
CNS0095601
Golden flower (diploid) 1
18.531
CNS0095602
Golden flower (diploid) 2
24.688
CNS0095603
Golden flower (diploid) 3
24.306
CNS0095604
Slightly white alabastrum(tetraploid) 1
19.974
CNS0095605
Slightly white alabastrum(tetraploid) 2
16.863
CNS0095606
Slightly white alabastrum(tetraploid) 3
27.074
CNS0095607
Whole white alabastrum(tetraploid) 1
17.831
CNS0095608
Whole white alabastrum(tetraploid) 2
14.478
CNS0095609
Whole white alabastrum(tetraploid) 3
20.639
CNS0095610
Silvery flower (tetraploid) 1
26.076
CNS0095611
Silvery flower (tetraploid) 2
26.455
CNS0095612
Silvery flower (tetraploid) 3
27.664
CNS0095613
Golden flower (tetraploid) 1
15.940
CNS0095614
Golden flower (tetraploid) 2
20.586
CNS0095615
Golden flower (tetraploid) 3
27.229
CRA001975
CRR073297
Stem 1
19.952
CRR073298
Stem 2
20.392
CRR073299
Stem 3
24.582
CRR073300
Leaf 1
25.243
CRR073301
Leaf 2
22.719
CRR073302
Leaf 3
22.498
CRR073303
Juvenile bud 1
18.000
CRR073304
Juvenile bud 2
15.155
CRR073305
Juvenile bud 3
18.049
CRR073306
Third green 1
13.385
CRR073307
Third green 2
14.482
CRR073308
Third green 3
13.188
CRR073309
Second white 1
11.943
CRR073310
Second white 2
13.930
CRR073311
Second white 3
13.979
CRR073312
Silver flowering 1
12.061
CRR073313
Silver flowering 2
9.014
CRR073314
Silver flowering 3
7.375
CRR073315
Gold flowering 1
16.306
CRR073316
Gold flowering 2
24.842
CRR073317
Gold flowering 3
16.198
CRR073318
Tawny withering 1
24.161
CRR073319
Tawny withering 2
19.515
CRR073320
Tawny withering 3
33.557