Gene detail

Detail information of GWHGAAZE013636

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009759243.1	9.02989E-98	PREDICTED: peroxidase 57-like [Nicotiana sylvestris]
Swissprot	tr\|Q93V93\|PER44_ARATH	4E-75	Peroxidase 44 (Precursor)
trEMBL	tr\|M5XMU7\|M5XMU7_PRUPE	2E-96	Uncharacterized protein {ECO:0000313\|EMBL:EMJ27427.1}
TAIR10	AT4G26010.1	4E-63	Peroxidase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	105712608	105714279	+
GWHAAZE00000003	mRNA	105712608	105714279	+
GWHAAZE00000003	exon	105712608	105713030	+
GWHAAZE00000003	exon	105713524	105714279	+
GWHAAZE00000003	CDS	105712608	105713030	+
GWHAAZE00000003	CDS	105713524	105714279	+

Transcript Sequence
>GWHTAAZE013650 ATGGAAGCTAGGGCCAGGCTTGTTACAACATTCTTCATCTTGTCATCAATCATCTCTTCACTGGCCCCAGCTTTCGCTTATTTGGGCAATAATGGAATAGCCAAACCCCAACCACAACCATCTTCTTACGGTGAACCAAAAACTTCCCCTGAAGAATATGAATTTAAAGGCGACTATAACGTACAATTCAACCCTTTTGGTGGTGATTCTAATACTATCGACGAGTCCAGTGCTACCTACAACAACGATGCATACCAAGCAATGGCTAAAGGCAAGGAAGCGTTGCTGCGTGTAGGTTACTATGCACGCACTTGCCCACAAGCTGAGAAGATTGTTTATGACATTGTCGCCAAACGCTCCCAGTACAAAGCTGACCTTCCTGCTGGCTTCGTTCGCATGTTTTTCCATGACTGCTTCATTTCCGGATGCGATGCCTCTATTCTCTTGGACAAGACACCAACAGGTGAGAGAGTAGAGAAGGAATCGCCGGCCAACGCCGCCAGTCTGAAAGGCCTGGAGGTGATCGACGAGATCAAAGCCGCCCTCGAACGCAAATGCCCACAAACAGTCTCCTGCTCCGACATCTTGGCCTTCGCCGCCCGCGACTCCATGGTTCTCTCAGGCGTCCCCCACTTCCCCATCCCCTCCGGGCGACGAGACTCCCTCTCCTCCCGGGAATCCGACGTCAACGAGATCAGCCTCCCCGGCCCCGCCGAGCCCCTCGACAACATCATCGCTGCTTTCGTCAAAAACGGCCTCACAGTCGAGGACATGGTGGTCTTAACGGGGGCCCACTCAATTGGTGTGGCCCATTGCCCTACCGTTGCTTACCGGCCCTTCCAGCCCAATGCGGCCCAAGAATTGGACTGGAGGCTGAGGGTGGATATAGAGCATATTTGTACACCGGTTAATGCGGGTGCTGTTTTGCCCTTTGACCCAATTACTAATTACGAGATGGATGGGTATTTTTACAAGACCGTTTCGGACAACAAAGCGTTGTTGGAATCTGATCAGAAGATGGGTATGGATCCCAGAACGGGTGGGTATGTGGGGCAAATGGCTAATGATGAAGCTGGGTGGTTGCGTAAATTTGGGAGGTCGTTTGCTAAAATGGGGAATATTCATGTGATTACGGGTGAAAATGGGGAGATTAGGCAAAATTGCCGATTTGTAAACTAG

Network for GWHGAAZE013636

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00141.24	peroxidase	116	356	8.90E-59

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00430	E1.11.1.7	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Phenylpropanoid biosynthesis	map00940

Gene Ontology

GO term	Ontology	Name
GO:0042744	biological_process	hydrogen peroxide catabolic process
GO:0006979	biological_process	response to oxidative stress
GO:0055114	biological_process	oxidation-reduction process
GO:0004601	molecular_function	peroxidase activity
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.340
	SRR3591706	second leaf	1.496
	SRR3591707	mature leaf	0.996
	SRR3591708	Shoot apex	1.432
	SRR3591709	Stem	1.731
	SRR3591710	White floral bud	311.634
	SRR3591711	White flower	16.402
	SRR3591712	Green floral bud	207.768
	SRR3591713	Yellow flower	12.757
SRP173429	SRR8316895	Juvenile bud stage	3.920
	SRR8316896	Juvenile bud stage	19.145
	SRR8316897	Juvenile bud stage	12.869
	SRR8316894	Third green stage	8.456
	SRR8316900	Third green stage	49.662
	SRR8316901	Third green stage	60.210
	SRR8316898	Complete white stage	0.701
	SRR8316899	Complete white stage	0.292
	SRR8316903	Complete white stage	1.892
	SRR8316902	Silver flowering stage	5.328
	SRR8316904	Silver flowering stage	4.045
	SRR8316905	Silver flowering stage	1.283
	SRR8316906	Gold flowering stage	0.500
	SRR8316907	Gold flowering stage	0.510
	SRR8316908	Gold flowering stage	0.648
SRP132670	SRR6706286	Control	42.314
	SRR6706287	Light intensity 50%	39.514
	SRR6706288	Light intensity 20%	41.528
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	42.008
	CNS0095593	Slightly white alabastrum(diploid) 2	35.738
	CNS0095594	Slightly white alabastrum(diploid) 3	49.199
	CNS0095595	Whole white alabastrum(diploid) 2	125.457
	CNS0095596	Whole white alabastrum(diploid) 3	134.450
	CNS0095597	Whole white alabastrum(diploid) 4	201.743
	CNS0095598	Silvery flower (diploied) 1	7.226
	CNS0095599	Silvery flower (diploied) 2	36.542
	CNS0095600	Silvery flower (diploied) 3	8.361
	CNS0095601	Golden flower (diploid) 1	9.815
	CNS0095602	Golden flower (diploid) 2	7.031
	CNS0095603	Golden flower (diploid) 3	6.036
	CNS0095604	Slightly white alabastrum(tetraploid) 1	111.613
	CNS0095605	Slightly white alabastrum(tetraploid) 2	132.027
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.937
	CNS0095607	Whole white alabastrum(tetraploid) 1	319.524
	CNS0095608	Whole white alabastrum(tetraploid) 2	355.947
	CNS0095609	Whole white alabastrum(tetraploid) 3	140.134
	CNS0095610	Silvery flower (tetraploid) 1	8.945
	CNS0095611	Silvery flower (tetraploid) 2	21.738
	CNS0095612	Silvery flower (tetraploid) 3	51.616
	CNS0095613	Golden flower (tetraploid) 1	12.465
	CNS0095614	Golden flower (tetraploid) 2	1.856
	CNS0095615	Golden flower (tetraploid) 3	33.883
CRA001975	CRR073297	Stem 1	12.131
	CRR073298	Stem 2	12.739
	CRR073299	Stem 3	8.462
	CRR073300	Leaf 1	68.525
	CRR073301	Leaf 2	43.910
	CRR073302	Leaf 3	24.623
	CRR073303	Juvenile bud 1	78.176
	CRR073304	Juvenile bud 2	87.199
	CRR073305	Juvenile bud 3	8.380
	CRR073306	Third green 1	43.674
	CRR073307	Third green 2	52.066
	CRR073308	Third green 3	50.505
	CRR073309	Second white 1	2.878
	CRR073310	Second white 2	7.584
	CRR073311	Second white 3	7.790
	CRR073312	Silver flowering 1	36.364
	CRR073313	Silver flowering 2	29.065
	CRR073314	Silver flowering 3	17.452
	CRR073315	Gold flowering 1	40.039
	CRR073316	Gold flowering 2	16.025
	CRR073317	Gold flowering 3	13.334
	CRR073318	Tawny withering 1	50.895
	CRR073319	Tawny withering 2	44.206
	CRR073320	Tawny withering 3	49.685