Detail information of GWHGAAZE013827


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO85072.12.7068E-160hypothetical protein CISIN_1g019961mg [Citrus sinensis]
trEMBLtr|A0A067HB62|A0A067HB62_CITSI1E-160Uncharacterized protein {ECO:0000313|EMBL:KDO85072.1}
TAIR10AT1G63610.16E-115Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene11775021182220-
GWHAAZE00000004mRNA11775021182220-
GWHAAZE00000004exon11821881182220-
GWHAAZE00000004exon11813611181450-
GWHAAZE00000004exon11811611181241-
GWHAAZE00000004exon11809421181073-
GWHAAZE00000004exon11787281178946-
GWHAAZE00000004exon11779091178001-
GWHAAZE00000004exon11775021177666-
GWHAAZE00000004CDS11821881182220-
GWHAAZE00000004CDS11813611181450-
GWHAAZE00000004CDS11811611181241-
GWHAAZE00000004CDS11809421181073-
GWHAAZE00000004CDS11787281178946-
GWHAAZE00000004CDS11779091178001-
GWHAAZE00000004CDS11775021177666-
Transcript Sequence

Network for GWHGAAZE013827

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0294


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05542.12DUF760191004.50E-20
PF05542.12DUF7601712545.90E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf35.696
SRR3591706second leaf54.808
SRR3591707mature leaf47.041
SRR3591708Shoot apex57.742
SRR3591709Stem26.425
SRR3591710White floral bud44.613
SRR3591711White flower48.670
SRR3591712Green floral bud71.432
SRR3591713Yellow flower35.706
SRP173429 SRR8316895Juvenile bud stage 41.241
SRR8316896Juvenile bud stage 48.235
SRR8316897Juvenile bud stage 25.102
SRR8316894Third green stage 21.240
SRR8316900Third green stage 77.374
SRR8316901Third green stage 65.870
SRR8316898Complete white stage 22.802
SRR8316899Complete white stage 84.320
SRR8316903Complete white stage 29.594
SRR8316902Silver flowering stage17.798
SRR8316904Silver flowering stage17.787
SRR8316905Silver flowering stage9.917
SRR8316906Gold flowering stage 32.775
SRR8316907Gold flowering stage 29.781
SRR8316908Gold flowering stage 32.587
SRP132670SRR6706286Control43.960
SRR6706287Light intensity 50%50.261
SRR6706288Light intensity 20%53.385
CNP0000432CNS0095592Slightly white alabastrum(diploid) 134.179
CNS0095593Slightly white alabastrum(diploid) 228.802
CNS0095594Slightly white alabastrum(diploid) 329.382
CNS0095595Whole white alabastrum(diploid) 225.902
CNS0095596Whole white alabastrum(diploid) 328.749
CNS0095597Whole white alabastrum(diploid) 427.512
CNS0095598Silvery flower (diploied) 137.703
CNS0095599Silvery flower (diploied) 232.785
CNS0095600Silvery flower (diploied) 339.768
CNS0095601Golden flower (diploid) 132.173
CNS0095602Golden flower (diploid) 236.127
CNS0095603Golden flower (diploid) 336.194
CNS0095604Slightly white alabastrum(tetraploid) 136.649
CNS0095605Slightly white alabastrum(tetraploid) 237.409
CNS0095606Slightly white alabastrum(tetraploid) 366.133
CNS0095607Whole white alabastrum(tetraploid) 119.882
CNS0095608Whole white alabastrum(tetraploid) 222.327
CNS0095609Whole white alabastrum(tetraploid) 362.284
CNS0095610Silvery flower (tetraploid) 138.364
CNS0095611Silvery flower (tetraploid) 251.544
CNS0095612Silvery flower (tetraploid) 338.619
CNS0095613Golden flower (tetraploid) 117.583
CNS0095614Golden flower (tetraploid) 232.144
CNS0095615Golden flower (tetraploid) 318.927
CRA001975CRR073297Stem 149.425
CRR073298Stem 245.394
CRR073299Stem 342.718
CRR073300Leaf 144.890
CRR073301Leaf 239.254
CRR073302Leaf 346.143
CRR073303Juvenile bud 149.500
CRR073304Juvenile bud 241.452
CRR073305Juvenile bud 330.386
CRR073306Third green 118.791
CRR073307Third green 26.253
CRR073308Third green 310.843
CRR073309Second white 116.189
CRR073310Second white 211.744
CRR073311Second white 38.726
CRR073312Silver flowering 15.940
CRR073313Silver flowering 26.470
CRR073314Silver flowering 33.314
CRR073315Gold flowering 149.213
CRR073316Gold flowering 268.321
CRR073317Gold flowering 339.595
CRR073318Tawny withering 116.598
CRR073319Tawny withering 217.117
CRR073320Tawny withering 317.101