Detail information of GWHGAAZE013874


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007226751.13.36805E-78hypothetical protein PRUPE_ppa018923mg [Prunus persica]
Swissprottr|Q94K80|LRP1C_ARATH6E-22La-related protein 1C
trEMBLtr|M5Y7L2|M5Y7L2_PRUPE1E-78Uncharacterized protein {ECO:0000313|EMBL:EMJ27950.1}
TAIR10AT5G66100.10.00000002winged-helix DNA-binding transcription factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene19440031945870+
GWHAAZE00000004mRNA19440031945870+
GWHAAZE00000004exon19440031944533+
GWHAAZE00000004exon19448381945423+
GWHAAZE00000004exon19454941945650+
GWHAAZE00000004exon19457561945870+
GWHAAZE00000004five_prime_UTR19440031944083+
GWHAAZE00000004CDS19440841944533+
GWHAAZE00000004CDS19448381945423+
GWHAAZE00000004CDS19454941945650+
GWHAAZE00000004CDS19457561945870+
Transcript Sequence

Network for GWHGAAZE013874

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0245


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05383.18La3894324.80E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.824
SRR3591706second leaf10.982
SRR3591707mature leaf7.420
SRR3591708Shoot apex17.369
SRR3591709Stem13.787
SRR3591710White floral bud19.666
SRR3591711White flower10.249
SRR3591712Green floral bud14.370
SRR3591713Yellow flower5.704
SRP173429 SRR8316895Juvenile bud stage 14.769
SRR8316896Juvenile bud stage 19.680
SRR8316897Juvenile bud stage 6.788
SRR8316894Third green stage 9.051
SRR8316900Third green stage 19.715
SRR8316901Third green stage 20.682
SRR8316898Complete white stage 5.726
SRR8316899Complete white stage 22.561
SRR8316903Complete white stage 11.407
SRR8316902Silver flowering stage4.142
SRR8316904Silver flowering stage6.984
SRR8316905Silver flowering stage3.009
SRR8316906Gold flowering stage 6.249
SRR8316907Gold flowering stage 8.850
SRR8316908Gold flowering stage 9.182
SRP132670SRR6706286Control33.255
SRR6706287Light intensity 50%31.002
SRR6706288Light intensity 20%31.622
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.830
CNS0095593Slightly white alabastrum(diploid) 214.235
CNS0095594Slightly white alabastrum(diploid) 311.690
CNS0095595Whole white alabastrum(diploid) 210.021
CNS0095596Whole white alabastrum(diploid) 39.806
CNS0095597Whole white alabastrum(diploid) 49.981
CNS0095598Silvery flower (diploied) 114.921
CNS0095599Silvery flower (diploied) 29.121
CNS0095600Silvery flower (diploied) 312.637
CNS0095601Golden flower (diploid) 110.368
CNS0095602Golden flower (diploid) 211.157
CNS0095603Golden flower (diploid) 311.183
CNS0095604Slightly white alabastrum(tetraploid) 116.350
CNS0095605Slightly white alabastrum(tetraploid) 213.866
CNS0095606Slightly white alabastrum(tetraploid) 327.250
CNS0095607Whole white alabastrum(tetraploid) 18.001
CNS0095608Whole white alabastrum(tetraploid) 28.272
CNS0095609Whole white alabastrum(tetraploid) 318.878
CNS0095610Silvery flower (tetraploid) 115.747
CNS0095611Silvery flower (tetraploid) 216.186
CNS0095612Silvery flower (tetraploid) 311.230
CNS0095613Golden flower (tetraploid) 15.846
CNS0095614Golden flower (tetraploid) 210.548
CNS0095615Golden flower (tetraploid) 36.121
CRA001975CRR073297Stem 123.311
CRR073298Stem 219.804
CRR073299Stem 38.690
CRR073300Leaf 122.277
CRR073301Leaf 223.770
CRR073302Leaf 39.377
CRR073303Juvenile bud 18.289
CRR073304Juvenile bud 27.117
CRR073305Juvenile bud 313.600
CRR073306Third green 14.456
CRR073307Third green 23.964
CRR073308Third green 35.378
CRR073309Second white 12.097
CRR073310Second white 21.641
CRR073311Second white 32.309
CRR073312Silver flowering 12.093
CRR073313Silver flowering 23.477
CRR073314Silver flowering 31.748
CRR073315Gold flowering 12.183
CRR073316Gold flowering 27.061
CRR073317Gold flowering 33.910
CRR073318Tawny withering 111.012
CRR073319Tawny withering 28.102
CRR073320Tawny withering 37.593