Detail information of GWHGAAZE013916


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007017754.16.28375E-79SAUR-like auxin-responsive protein family [Theobroma cacao]
Swissprottr|P33083|AX6B_SOYBN8E-19Auxin-induced protein 6B
trEMBLtr|A0A061FKF0|A0A061FKF0_THECC2E-79SAUR-like auxin-responsive protein family {ECO:0000313|EMBL:EOY14979.1}
TAIR10AT1G75590.19E-52SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene27453612745804-
GWHAAZE00000004mRNA27453612745804-
GWHAAZE00000004exon27453612745804-
GWHAAZE00000004CDS27453612745804-
Transcript Sequence

Network for GWHGAAZE013916

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible12985.20E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.747
SRR3591706second leaf1.420
SRR3591707mature leaf0.000
SRR3591708Shoot apex7.382
SRR3591709Stem5.086
SRR3591710White floral bud0.220
SRR3591711White flower0.208
SRR3591712Green floral bud0.343
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.126
SRR8316896Juvenile bud stage 0.150
SRR8316897Juvenile bud stage 0.145
SRR8316894Third green stage 0.195
SRR8316900Third green stage 1.352
SRR8316901Third green stage 0.522
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.912
SRR8316903Complete white stage 0.577
SRR8316902Silver flowering stage0.113
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control1.022
SRR6706287Light intensity 50%1.218
SRR6706288Light intensity 20%0.969
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.630
CNS0095593Slightly white alabastrum(diploid) 25.932
CNS0095594Slightly white alabastrum(diploid) 33.099
CNS0095595Whole white alabastrum(diploid) 20.811
CNS0095596Whole white alabastrum(diploid) 30.339
CNS0095597Whole white alabastrum(diploid) 40.160
CNS0095598Silvery flower (diploied) 10.460
CNS0095599Silvery flower (diploied) 20.270
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.104
CNS0095603Golden flower (diploid) 30.079
CNS0095604Slightly white alabastrum(tetraploid) 10.297
CNS0095605Slightly white alabastrum(tetraploid) 20.386
CNS0095606Slightly white alabastrum(tetraploid) 31.017
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.439
CNS0095609Whole white alabastrum(tetraploid) 30.221
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.350
CNS0095612Silvery flower (tetraploid) 30.364
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.169
CRR073298Stem 22.063
CRR073299Stem 33.428
CRR073300Leaf 12.430
CRR073301Leaf 22.076
CRR073302Leaf 33.595
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 32.398
CRR073306Third green 10.126
CRR073307Third green 20.844
CRR073308Third green 30.833
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.125
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 13.000
CRR073316Gold flowering 22.365
CRR073317Gold flowering 31.803
CRR073318Tawny withering 19.976
CRR073319Tawny withering 22.750
CRR073320Tawny withering 312.073