Detail information of GWHGAAZE013932


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAIB06025.10CP3 [Hevea brasiliensis]
Swissprottr|P25804|CYSP_PEA0Cysteine proteinase 15A (Precursor)
trEMBLtr|A0A060D3T9|A0A060D3T9_HEVBR0CP3 {ECO:0000313|EMBL:AIB06025.1}
TAIR10AT4G39090.12E-143Papain family cysteine protease

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene30997813102091-
GWHAAZE00000004mRNA30997813102091-
GWHAAZE00000004exon30997813100049-
GWHAAZE00000004exon31001453100388-
GWHAAZE00000004exon31013383101457-
GWHAAZE00000004exon31016423102091-
GWHAAZE00000004CDS31016423102091-
GWHAAZE00000004CDS31013383101457-
GWHAAZE00000004CDS31001453100388-
GWHAAZE00000004CDS30997813100049-
Transcript Sequence

Network for GWHGAAZE013932

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08246.13Inhibitor_I29501065.10E-10
PF00112.24Peptidase_C11363548.90E-65
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01373CTSF Lysosome map04142
Apoptosismap04210
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0006508biological_processproteolysis
GO:0008234molecular_functioncysteine-type peptidase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf543.572
SRR3591706second leaf967.999
SRR3591707mature leaf1877.161
SRR3591708Shoot apex694.497
SRR3591709Stem1591.508
SRR3591710White floral bud1380.718
SRR3591711White flower2094.616
SRR3591712Green floral bud970.772
SRR3591713Yellow flower1708.936
SRP173429 SRR8316895Juvenile bud stage 339.950
SRR8316896Juvenile bud stage 571.644
SRR8316897Juvenile bud stage 183.184
SRR8316894Third green stage 210.635
SRR8316900Third green stage 547.518
SRR8316901Third green stage 574.443
SRR8316898Complete white stage 512.592
SRR8316899Complete white stage 1405.892
SRR8316903Complete white stage 909.185
SRR8316902Silver flowering stage1330.529
SRR8316904Silver flowering stage1616.220
SRR8316905Silver flowering stage1051.982
SRR8316906Gold flowering stage 3198.741
SRR8316907Gold flowering stage 3127.305
SRR8316908Gold flowering stage 3212.244
SRP132670SRR6706286Control1179.266
SRR6706287Light intensity 50%1137.716
SRR6706288Light intensity 20%1132.170
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1588.136
CNS0095593Slightly white alabastrum(diploid) 2625.561
CNS0095594Slightly white alabastrum(diploid) 3654.376
CNS0095595Whole white alabastrum(diploid) 2570.124
CNS0095596Whole white alabastrum(diploid) 3320.054
CNS0095597Whole white alabastrum(diploid) 4597.212
CNS0095598Silvery flower (diploied) 11163.558
CNS0095599Silvery flower (diploied) 21136.926
CNS0095600Silvery flower (diploied) 31948.450
CNS0095601Golden flower (diploid) 11404.071
CNS0095602Golden flower (diploid) 22468.588
CNS0095603Golden flower (diploid) 32359.517
CNS0095604Slightly white alabastrum(tetraploid) 1386.253
CNS0095605Slightly white alabastrum(tetraploid) 2307.116
CNS0095606Slightly white alabastrum(tetraploid) 3725.708
CNS0095607Whole white alabastrum(tetraploid) 1333.171
CNS0095608Whole white alabastrum(tetraploid) 2237.919
CNS0095609Whole white alabastrum(tetraploid) 3428.244
CNS0095610Silvery flower (tetraploid) 11576.756
CNS0095611Silvery flower (tetraploid) 21759.711
CNS0095612Silvery flower (tetraploid) 31207.247
CNS0095613Golden flower (tetraploid) 11243.073
CNS0095614Golden flower (tetraploid) 21640.865
CNS0095615Golden flower (tetraploid) 32045.867
CRA001975CRR073297Stem 1777.944
CRR073298Stem 2780.628
CRR073299Stem 31182.402
CRR073300Leaf 1960.115
CRR073301Leaf 2924.421
CRR073302Leaf 3918.119
CRR073303Juvenile bud 11113.238
CRR073304Juvenile bud 21103.257
CRR073305Juvenile bud 31879.184
CRR073306Third green 12654.785
CRR073307Third green 22257.274
CRR073308Third green 32115.119
CRR073309Second white 13719.074
CRR073310Second white 22546.097
CRR073311Second white 32068.583
CRR073312Silver flowering 12345.688
CRR073313Silver flowering 23186.834
CRR073314Silver flowering 32106.100
CRR073315Gold flowering 12640.137
CRR073316Gold flowering 22787.337
CRR073317Gold flowering 33765.066
CRR073318Tawny withering 11724.303
CRR073319Tawny withering 21295.179
CRR073320Tawny withering 31243.839